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Name : Gmet_1338 (Gmet_1338) Accession : YP_006720305.1 Strain : Geobacter metallireducens GS-15 Genome accession: NC_007517 Putative virulence/resistance : Virulence Product : NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase Function : - COG functional category : - COG ID : - EC number : - Position : 1496121 - 1498040 bp Length : 1920 bp Strand : + Note : - DNA sequence : ATGCTCTCCCAACGTCGCCTGATGGTCTTCGCCCTCGATACGGCGTCCATCGCTGCGTCGTTCCTCCTCGCCTTCCTCCT CCGCTTCGACTTCACCTTTCCGCCGTTGTACCACGAAATTATCAAGGACGGCCTGCTGGTTGTCCTGCTTGTAAAGCCTC TGGTTTTCCTTTTTTCGGGCATGTACCGCAGTATCTGGAAATACGCTTCATTACAGGACGGCATCGAAATTTTCAAGGTA GTAACCCTTTCCACGCTCATCACCTCCTTTGTCCTTTTTTTCCTGCATGATACCAGTGCCATGCCCCGTTCCATCTATGT GCTCGACTGGGTTCTGCTCTTTGCCATGGTATCGACGTCACGGCTTCTGTGGCGGGTCTACCGTGAGACCTACATCATCC CCCGCTACCATACCGGCAAGCGGACGCTGATCGTCGGAGCCGGCGAGGCGGGCAACCTGCTATTGAAGGAAATAAGAAAG CAGAAAAATCCAGCAAACCAGGTCATCGGATTCCTCGACGACGACCCGGCAAAGCAGGGGATGCGCCTGGGAGGGATTCC GGTTATGGGTGATCTCGGCCGCCTTCGGGCCGCCATCCGGAAGCACCGGATTGAAGAGGTCATTATCGCCATCGCGACTG CCCAGGGTGCTCTAACGCGCCAGGTTGTCTCCTGCTGCAAGGAGACCAAGGTCAGGTTCAAGACCCTGCCGGGGATCAAG GATATCATCGATGGCACGGTCTCCATCTCCCAGATCAAGGATGTGGAGATCGAGGACATTCTCGGCCGTGAGCCGGTGAA GCTGGACCTGGAAACCATCCGGGGATACCTGACCAACAAGCGCGTACTGGTGACCGGCGCGGCGGGGAGCATCGGCAGCG AAATCTGCCGCCAGGTGGCAGCGTTCTCCCCCTACAAGCTGCTCCTCTTCGAGAGCGCGGAAACCCCCCTCTACCAGATC GAAAAAGAGCTTACGGCCAGCCACCCTGATCTCCGGATCATTCCGGTCATCGGCGACGTGCGGGACCAGGCCAGGGTCGA GATGGTTTTTGACGAGTTCCAGCCCGAGGTGGTCTTTCACGCGGCAGCCTACAAGCATGTGCCGATGATGGAGTATAACC CGGTGGAAGCGGTTACCAACAATATCGGCGGTACTCGAACGCTGGCGAATGCAGCCCATCGGTTCGGGGTTAAGAATTTC GTCATGATCTCCACCGACAAGGCGGTGAACCCGACCAACATCATGGGGGCTTCGAAGCGGGTTGCGGAGATGTATGTCCA GGGCCTGGCGAGGAAGAGCCGGACAAATTTTACCACTGTCCGTTTTGGTAACGTGCTGGGGAGCAACGGGAGCGTGATCC CGCTCTTCAAGGAGCAGATCAAGGCGGGAGGGCCGGTTACGGTCACCGACCCCAAGGTGATCCGCTACTTCATGACCATC CCCGAGGCGTGCCAGCTGGTGCTCCAGGCAGGGTGCATCGGCAACGGCGGCGAGATCTTCGTACTCGACATGGGGGAGCC GGTCCGCATCCTTGACCTGGCGGAAGAGCTGATCAGGCTTTCGGGGTTTGTTCCCCATGAGGAGATTGATATCGTTTTCA CGGGATTGCGGCCCGGCGAGAAGCTTTTTGAGGAACTGCTCATCGACGGCGAGGGGATCAAGCCGACACGGCACGGGAAG ATCAAGGTTCTTGCGGCTATGGATTCCGATTTCGATGCCGTTGAAAGGAATCTGGGCGTTCTCTTTGCCATGGCCGGGAA CGCCGACATCGCGGGTATCGTGAAGCAGCTTCGGGTGCTTATCCCGGAATTCTCGCCCCAGTATTCTTTCAACGGTCCGG CCCCCATTGCGTTCCAGCGGGTCCGTCCCGATCTTTTCCCGCCCCCGTCTTCGAAGGTGGTCAAGTTGCAGAAGTCGTGA Protein sequence : MLSQRRLMVFALDTASIAASFLLAFLLRFDFTFPPLYHEIIKDGLLVVLLVKPLVFLFSGMYRSIWKYASLQDGIEIFKV VTLSTLITSFVLFFLHDTSAMPRSIYVLDWVLLFAMVSTSRLLWRVYRETYIIPRYHTGKRTLIVGAGEAGNLLLKEIRK QKNPANQVIGFLDDDPAKQGMRLGGIPVMGDLGRLRAAIRKHRIEEVIIAIATAQGALTRQVVSCCKETKVRFKTLPGIK DIIDGTVSISQIKDVEIEDILGREPVKLDLETIRGYLTNKRVLVTGAAGSIGSEICRQVAAFSPYKLLLFESAETPLYQI EKELTASHPDLRIIPVIGDVRDQARVEMVFDEFQPEVVFHAAAYKHVPMMEYNPVEAVTNNIGGTRTLANAAHRFGVKNF VMISTDKAVNPTNIMGASKRVAEMYVQGLARKSRTNFTTVRFGNVLGSNGSVIPLFKEQIKAGGPVTVTDPKVIRYFMTI PEACQLVLQAGCIGNGGEIFVLDMGEPVRILDLAEELIRLSGFVPHEEIDIVFTGLRPGEKLFEELLIDGEGIKPTRHGK IKVLAAMDSDFDAVERNLGVLFAMAGNADIAGIVKQLRVLIPEFSPQYSFNGPAPIAFQRVRPDLFPPPSSKVVKLQKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-102 | 49 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-105 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Gmet_1338 | YP_006720305.1 | NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase | VFG1300 | Protein | 3e-102 | 48 |
| Gmet_1338 | YP_006720305.1 | NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase | VFG0029 | Protein | 7e-82 | 42 |
