Gene Information

Name : kdsB (Gmet_1275)
Accession : YP_006720241.1
Strain : Geobacter metallireducens GS-15
Genome accession: NC_007517
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1436258 - 1437022 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATAACAGCAATCATTCCTGCCAGATACGCCTCGACCCGTTTCCCCGGCAAGGCTCTCGCCGAGATCATTGGCAA
GCCAATGGTTCAGCATGTCTACGAGCGGACAGCCAAGGCCGGTCTGGTGTCCGAGGTTATTGTCGCTACCGATGACGAGC
GGGTTGCCGAAGCCGTTCGTGCTTTCGGAGGCCGGGTGGAAATGACTTCCGCGACCCACGAAACAGGTACCGACCGTCTT
GCCGAGGTTGCTGCCCGCATCGATGCAGATATCATTGTGAACGTTCAGGGTGATGAGCCCCTTATCGAACCTGCCATGAT
CGACGAGGCAATTGCGCCTCTGGTTGCCGACGCATCGATCCGGATGGGGACCCTCAAGAGCCGTATCAAGTCGCTGCACG
ATTTCCTGAGTCCCAATGTGGTTAAGGTCGTAACCGATCGCGAGGGAGATGCCCTGTACTTCTCCCGTTCGCCTCTCCCC
AACTTCCGCGACAAGTGGAACGACCTGAAGGACGAGGCGTTCGTCACCGGACGGCTTTTGTGTTACAAACACGTGGGGCT
CTATGTCTATCGACGCGACTTCCTCCTGGCGTTCGCCCGGATGGCGCCCACTCCCCTTGAGCTTGCGGAGAAACTGGAGC
AGTTGAGGGTTTTGGAGAACGGCTTCCGCATAAGGGTGGTGGAAACGTCCTTCGAGTCGATCGGTGTCGATACGCCGAGC
GATCTGGATAAGGTCGTCGAAAAGTTGTCGAGATTCCAAATCTGA

Protein sequence :
MKITAIIPARYASTRFPGKALAEIIGKPMVQHVYERTAKAGLVSEVIVATDDERVAEAVRAFGGRVEMTSATHETGTDRL
AEVAARIDADIIVNVQGDEPLIEPAMIDEAIAPLVADASIRMGTLKSRIKSLHDFLSPNVVKVVTDREGDALYFSRSPLP
NFRDKWNDLKDEAFVTGRLLCYKHVGLYVYRRDFLLAFARMAPTPLELAEKLEQLRVLENGFRIRVVETSFESIGVDTPS
DLDKVVEKLSRFQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-46 47
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 3e-46 47
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-46 47