Gene Information

Name : pyk (Gmet_0122)
Accession : YP_006719081.1
Strain : Geobacter metallireducens GS-15
Genome accession: NC_007517
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 147911 - 149353 bp
Length : 1443 bp
Strand : +
Note : -

DNA sequence : 
ATGGATAAATCGTCGCGCAAAACCAAGATCGTAGCCACCCTCGGACCGGCCAGCTCCTCGCCGGAGATGATCAGCAAGCT
CATGGAGGCAGGGGCAGACCTTTTCCGCCTCAACTTCTCCCACGGGGCCAACGACCAGCGCCGGGAGACCATTGCCACCA
TCCGGCGTCTTTCTGCCGCCCGGGGAAAGGAGATCGGCATCCTGGCCGACCTCCAGGGGCCAAAGATCAGGACCGGCCGC
ATGGAGAACGGCGCCATCTCCCTGCGCAAGGGAGACCCCCTCGACATCGTCACCGATGAGGTCCTCGGCACCCCGACCCT
CATCTCCACCATCTACAAGGCCCTCCCCCATGACGTGAAGCCCGGCTCCCGCATTCTCATGGACGACGGCCTCATCGAGC
TGAAGGTCCATTCGGTGGAGGGAAACCTGGTCCGCTGCACCGTGGTGGAGGGGGGAACCCTCAAGGACCTGAAGGGGATC
AACCTCCCCGGAGTCCATGTCTCGGCCCCCTCCCTCTCGGAGAAGGATCTGCGGGACCTGGAGTTCTGCCTGGCCGAGGG
GGTGGACTACATCGCCCTCTCCTTTGTCCGGAGCGCCGAGGACGTGGAGGGGCTCAAGCGGATCCTCTTCGAGCGCGGCA
TCCACATCCCCGTGGTGGCCAAGATCGAGAAGCCCGAGGCCCTGCGCAATTTCAAGAGCATCCTCAAAGCGGCCGACGGT
GTCATGGTGGCCCGGGGCGACCTGGGTGTTGAGATCAGCGCCGAGAAGGTCCCCCTCTTCCAGAAAAAAATCATCCGAGC
CTGCAACGAGGCGGGGAAGCCGGTTATCACCGCCACCCAGATGCTGGAATCGATGATCAGCCACCCGCGCCCCACCCGGG
CCGAGACCTCCGACGTGGCTAACGCCATCCTTGACGGGACCGACGCGGTCATGCTCTCGGGAGAGACCGCCTCGGGGCAG
TTCCCCCTGGAAGCGGTGCGGACCATGGCCAAGGTGGCCCTGGATGTGGAGCGCTACGCTCAGATGGAGGACACCCTCCC
CCAGCGGCGCCACAACCCGAGCATCGCCGAGGCGGTGGCCGAGGCCGCCTGCCGCGCCGCCGTCACCGTGGACGCCCGGG
CCATCTCGGTCATGACCCAGTCGGGGAGCACCGCCGCCCTCATCTCCAAGTTCCGGCCGCCGCTCCCCATCATCGCCTTT
ACCCAGTCCCTGGAGACCCGGCGGCGCCTCTCCCTCTACTGGGGGGTGAAGCCGCTCCCCATTGGCCCCATGACCGGCAC
CGACGAGCAGATCGCGGCCGTGGAATCGACGTTCCTCTCGGCGGGGTACCGCAAGGGAGACGTGATCGTCATAACCATGG
GGGTGCCGGTGGAGGCCCGAGGTTCCACGAACCTTATGAAGGTCCACAAGCTGGGGACGGGGAAGTTTTTCGAGATTTTC
TGA

Protein sequence : 
MDKSSRKTKIVATLGPASSSPEMISKLMEAGADLFRLNFSHGANDQRRETIATIRRLSAARGKEIGILADLQGPKIRTGR
MENGAISLRKGDPLDIVTDEVLGTPTLISTIYKALPHDVKPGSRILMDDGLIELKVHSVEGNLVRCTVVEGGTLKDLKGI
NLPGVHVSAPSLSEKDLRDLEFCLAEGVDYIALSFVRSAEDVEGLKRILFERGIHIPVVAKIEKPEALRNFKSILKAADG
VMVARGDLGVEISAEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVANAILDGTDAVMLSGETASGQ
FPLEAVRTMAKVALDVERYAQMEDTLPQRRHNPSIAEAVAEAACRAAVTVDARAISVMTQSGSTAALISKFRPPLPIIAF
TQSLETRRRLSLYWGVKPLPIGPMTGTDEQIAAVESTFLSAGYRKGDVIVITMGVPVEARGSTNLMKVHKLGTGKFFEIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-76 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-76 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-76 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-75 44
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 5e-68 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_006719081.1 pyruvate kinase VFG0479 Protein 2e-76 45