Gene Information

Name : Syncc9605_2384 (Syncc9605_2384)
Accession : YP_382671.1
Strain : Synechococcus sp. CC9605
Genome accession: NC_007516
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2198346 - 2199125 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence :
TTGTGGCGAGAAGTGACTAACGCCTCGGTGCCCATGACGGCCACGGCTCCCACCAAGGAAACGATCCTCGTGGTCGACGA
CGAGGCATCGATCCGCCGGATCCTGGAAACCCGTTTATCCATGATCGGGTACAACGTCGTGACCGCCTGCGACGGCACCG
AAGCTCTGGAATTGTTCCCCACCTGCACGCCCGACTTGGTGGTGCTGGACGTGATGATGCCAAAGCTGGACGGCTATGGC
GTGTGCCAGGAGCTGCGCAAGGAATCCGATGTTCCCATCGTGATGCTGACGGCCCTCGGCGATGTGGCCGACCGGATCAC
CGGACTTGAGCTAGGCGCCGATGACTACGTGGTGAAGCCCTTCAGCCCGAAGGAGCTGGAGGCCCGCATCCGCTGCTTGT
TGCGCCGGGTCGAGAAGGAGCAGGTGGCGGGCATTCCCAACTCCGGCGTCATCCAGGTCAGCGACCTGCGCATCGACACC
AACAAACGCCAAGTGTTCCGTGGCGATGAACGCATCCGCCTAACGGGGATGGAATTCAGCCTGTTGGAACTGCTGGTGAG
CCGTTCCGGTGAACCGTTCAACCGCGGCGAGATCCTTAAGGAAGTTTGGGGATACACCCCGGAACGCCACGTGGACACCC
GAGTGGTGGATGTTCATATCTCTCGCCTGCGTTCCAAATTGGAGGATGATCCTGCCAATCCCGAGTTGATCCTCACGGCT
CGGGGCACCGGCTATCTGTTCCAGCGCATCGTCGATTCCGTTGCCTCCGAAGGTCCCTGA

Protein sequence :
MWREVTNASVPMTATAPTKETILVVDDEASIRRILETRLSMIGYNVVTACDGTEALELFPTCTPDLVVLDVMMPKLDGYG
VCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCLLRRVEKEQVAGIPNSGVIQVSDLRIDT
NKRQVFRGDERIRLTGMEFSLLELLVSRSGEPFNRGEILKEVWGYTPERHVDTRVVDVHISRLRSKLEDDPANPELILTA
RGTGYLFQRIVDSVASEGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-31 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_003923.1003749.p0 Protein 3e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-44 48
Syncc9605_2384 YP_382671.1 two component transcriptional regulator BAC0125 Protein 7e-39 47
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_012469.1.7685629. Protein 1e-42 47
Syncc9605_2384 YP_382671.1 two component transcriptional regulator AE000516.2.gene3505. Protein 9e-40 47
Syncc9605_2384 YP_382671.1 two component transcriptional regulator HE999704.1.gene2815. Protein 5e-41 46
Syncc9605_2384 YP_382671.1 two component transcriptional regulator BAC0083 Protein 1e-35 44
Syncc9605_2384 YP_382671.1 two component transcriptional regulator BAC0197 Protein 1e-33 43
Syncc9605_2384 YP_382671.1 two component transcriptional regulator BAC0638 Protein 3e-28 42
Syncc9605_2384 YP_382671.1 two component transcriptional regulator HE999704.1.gene1528. Protein 2e-30 42
Syncc9605_2384 YP_382671.1 two component transcriptional regulator CP000034.1.gene3671. Protein 3e-38 42
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 4e-36 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 4e-36 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 4e-36 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 4e-36 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 4e-36 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 4e-36 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 4e-36 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 4e-36 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator BAC0308 Protein 1e-34 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator BAC0111 Protein 6e-35 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator CP004022.1.gene3215. Protein 7e-34 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator CP001918.1.gene5135. Protein 5e-25 41
Syncc9605_2384 YP_382671.1 two component transcriptional regulator AE016830.1.gene1681. Protein 2e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syncc9605_2384 YP_382671.1 two component transcriptional regulator VFG1390 Protein 1e-40 46
Syncc9605_2384 YP_382671.1 two component transcriptional regulator VFG0596 Protein 1e-31 42
Syncc9605_2384 YP_382671.1 two component transcriptional regulator VFG1389 Protein 7e-31 42