Gene Information

Name : Syncc9605_1627 (Syncc9605_1627)
Accession : YP_381931.1
Strain : Synechococcus sp. CC9605
Genome accession: NC_007516
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1496066 - 1498606 bp
Length : 2541 bp
Strand : -
Note : -

DNA sequence :
ATGTTTGAACGCTTCACCGAGAAGGCCATCAAAGTGATCATGCTGGCCCAGGAAGAGGCCCGCAGACTTGGTCACAACTT
CGTTGGTACTGAGCAAATTCTCCTCGGCCTGATCGGCGAGGGAACGGGTGTTGCTGCCAAGGTCCTCAAGTCGATGGGGG
TCAACCTCAAGGATGCCCGGGTTGAAGTTGAGAAGATCATCGGCCGTGGATCCGGCTTCGTTGCCGTTGAGATCCCCTTC
ACTCCCCGCGCCAAACGAGTGTTGGAGCTGTCTCTTGAAGAGGCTCGTCAGCTTGGTCACAACTACATCGGCACCGAGCA
CCTTCTGCTTGGTCTGATCCGTGAGGGCGAAGGTGTAGCCGCTCGGGTGCTGGAGAACCTCGGTGTTGATCTCGCCAAGG
TGCGCACCCAGGTGATTCGCATGCTGGGTGAAACCGCTGAAGTCTCCGCCGGTGGCGGTGGCGGCGGTGCCAAGGGATCC
ACCAAAACCCCCACCCTCGACGAGTTTGGCAATAACCTCACTCAGCTCGCCACCGAAGCGAAGCTCGACCCGGTGGTGGG
TCGTCACAACGAAATCGATCGAGTCATACAGATCCTGGGCCGCCGCACCAAAAACAACCCTGTGTTGATCGGCGAGCCCG
GTGTCGGTAAGACCGCCATCGCTGAAGGTCTGGCCCAGCGCATTCAGCAGGGCGACATCCCCGACATCCTCGAAGACAAG
CGCGTCCTGACCCTCGATATCGGTCTGTTGGTGGCTGGCACCAAATACCGGGGTGAATTTGAAGAGCGCCTCAAGAAGAT
CATGGAAGAGATCAAGTCGGCCGGGAACGTCATCCTTGTGATCGACGAGGTGCACACCCTGATTGGTGCCGGCGCTGCTG
AGGGAGCAATCGACGCAGCCAATATCCTCAAGCCGGCCCTCGCCCGAGGTGAGCTCCAGTGCATCGGTGCCACCACCCTT
GATGAGTATCGCAAGCACATCGAGCGGGACGCCGCACTTGAGCGCCGTTTCCAGCCGGTGAATGTGGGTGAGCCGTCCAT
CGACGACACCATCGAAATCCTGCGCGGCCTGCGCGAGCGTTACGAGCAGCACCACCGCCTCAAGATCACCGACGACGCCC
TTGTGGCGGCTGCAACCCTCGGCGATCGCTACATCTCTGATCGCTTCCTGCCCGACAAGGCCATCGATTTGATCGATGAA
GCAGGCTCTCGGGTGCGTTTGCTCAACTCGAAGCTGCCCCCCGCGGCCAAGGAGGTGGACAAAGAACTGCGTTCCGTCCA
GAAGGACAAGGAGGATGCCGTTCGCGATCAGGACTTCACCAAGGCTGGTGAACTGCGCGAGAAGGAAGTGGAACTGCGTG
AGCAGATCCGTTCTCTGCTGCAGGCCAACAAGGATGAGGCCAAGGCTGACACCACTGCTGAATCCGGAGAAACAGCTTTC
ACCGAGGCGGCTGCTTCAGACAGCTCACCGATGGTGAACGAGGAGGACATCGCTCAGATAGTTGCCTCCTGGACCGGTGT
TCCGGTGCAGAAGCTCACCGAGAGCGAGTCGGTCAAGCTGCTCAACATGGAGGAAACCCTCCACAAGCGTCTGATTGGCC
AGGACGAAGCCGTCAAGGCAGTGTCCAAGGCCATCCGCCGGGCCCGGGTCGGCTTGAAGAACCCCAACCGTCCGATCGCT
AGCTTCATCTTCTCCGGCCCCACCGGTGTGGGTAAAACCGAGCTCACCAAAGCTCTGGCCACCTACTTCTTCGGCAGCGA
GGAGGCGATGATCCGCCTCGACATGTCGGAATTCATGGAGCGCCACACGGTCAGCAAGCTGATCGGTTCGCCTCCGGGCT
ACGTAGGCTTCAACGAGGGCGGTCAGCTCACCGAAGCAGTGCGTCGCCGGCCTTACACCGTGGTGCTCTTCGATGAAATC
GAGAAGGCGCACCCCGACGTGTTCAACCTGCTGCTGCAGCTTCTGGAAGACGGTCGTCTGACCGATTCCAAGGGCCGCAC
GGTCGACTTCAAGAACACCCTGATCATCATGACCTCGAACATCGGTTCGAAGGTGATCGAGAAGGGTGGCGGCGGCCTCG
GCTTCGAATTCTCCGGTGAGAGCGCTGAGGAGTCTCAGTACACCCGGATCCGTTCCCTGGTGAATGAGGAGCTAAAGCAG
TACTTCCGCCCTGAATTCCTCAACCGTCTCGACGAGATTATCGTCTTCCGTCAGCTCAACCGCGACGAGGTCAAGGAGAT
CGCCGAGATTATGCTCAAGGAGGTCTTTGGCCGCATGGGCGATAAGGGCATCACCCTGACCGTGTCCGATGCGTTTAAGG
AGCGCCTGGTGGAGGAGGGCTACAACCCTGCCTATGGCGCACGTCCCTTGCGTCGGGCCGTCATGCGTCTTCTCGAGGAT
TCCCTCGCCGAAGAGGTGCTGTCTGGTCGGATCAAGGACGGCGAACACGCCGAAGTTGATGTCGACGAGAACAAGAAGGT
GGTGGTCCGCCACAAAGGTCAGGTGGACACGGCACCGCAACTTGCCGGTGCCAGCGTCTGA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVSAGGGGGGAKGS
TKTPTLDEFGNNLTQLATEAKLDPVVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDK
RVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL
DEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRERYEQHHRLKITDDALVAAATLGDRYISDRFLPDKAIDLIDE
AGSRVRLLNSKLPPAAKEVDKELRSVQKDKEDAVRDQDFTKAGELREKEVELREQIRSLLQANKDEAKADTTAESGETAF
TEAAASDSSPMVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHKRLIGQDEAVKAVSKAIRRARVGLKNPNRPIA
SFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEI
EKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQ
YFRPEFLNRLDEIIVFRQLNRDEVKEIAEIMLKEVFGRMGDKGITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLED
SLAEEVLSGRIKDGEHAEVDVDENKKVVVRHKGQVDTAPQLAGASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syncc9605_1627 YP_381931.1 ATPase VFG0079 Protein 0.0 59
Syncc9605_1627 YP_381931.1 ATPase VFG0080 Protein 7e-149 52