Gene Information

Name : Syncc9605_1007 (Syncc9605_1007)
Accession : YP_381320.1
Strain : Synechococcus sp. CC9605
Genome accession: NC_007516
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 953976 - 956564 bp
Length : 2589 bp
Strand : -
Note : -

DNA sequence :
ATGCAACCCACGGCGGAACAGTTCACAGAACAAGCCTGGGCCGCCATCATCGCCGCCCAGCAACTGGCGCAGAGCGCCAA
GCATCAGCAACTGGAAACGGAGCATCTGCTGCTTGCGCTGTTGCAGCAGAACGGGCTGGCTGGACGCATTCTCAGCAAAG
CAGGGGTCGATGTTGGCAATTTCCAGGCGGCCATCGACAGCCATCTCAGGCAGCAGCCCAGTCTTGGCTCTCCACCGGAA
TCGGTGTTTCTGGGACGCTCCCTGAACAGCTGCCTGGATCGCGCCGAAACAGCCCGCGATGGATTCAGTGACAGCTACAT
CGCCATCGAACATCTGTTGCTGGCCCTGGCCGACGATCAACGCTGCGGCAGGCAACTGCTCAGCCAAGCGGGCGTTGACA
CCAGCAAACTCAACGAAGCCATTACAGCCGTGCGAGGCAACCAGACGGTGACCGATCAAAACCCGGAAGGGACCTATGAA
TCGCTTGAGAAGTACGGACGGGACCTGACGGCCGCCGCCCGTGACGGAAAGCTGGACCCAGTGATCGGTCGCGACGAGGA
GATCCGTCGCACCATCCAGATCCTCAGCCGGCGCACCAAAAACAACCCCGTGCTGATCGGCGAACCAGGGGTGGGAAAGA
CCGCCATTGTTGAGGGACTGGCGCAGCGCATCGTCAACGGTGATGTGCCCCAGGCCTTGCAGAACCGTCAGCTCATCGCC
CTCGACATGGGAGCCCTGATCGCCGGTGCGAAATATCGCGGTGAGTTCGAGGAACGGCTCAAAGCTGTACTCAAGGAGGT
CACTGCCTCGGAAGGCCAGATCGTGCTGTTCATCGATGAAATCCACACGGTGGTGGGCGCTGGAGCCACCGGTGGAGCCA
TGGATGCCAGCAATCTGCTCAAGCCGATGCTGGCCCGGGGGGAACTGCGCTGCATTGGCGCCACCACCCTCGACGAGCAC
CGCCAGCACATCGAAAAAGATCCTGCCCTGGAGCGACGCTTCCAGCAGGTGCTGGTGGATCAACCCACGGTGGAAGACAC
GATTTCGATCCTGCGGGGTCTGAAAGAGCGTTATGAGGTGCATCACGGTGTGCGCATTGCCGACAGTGCCTTGGTGGCAG
CGGCTGTGTTGAGCAGCCGCTACATCGCCGACCGCTTTCTGCCGGACAAAGCGATCGATCTGGTGGATGAATCAGCTGCT
CGCCTGAAAATGGAGATCACCTCCAAACCGGAGGAGATCGATGAAATCGATCGCAAGATCCTGCAGCTGGAGATGGAGAA
GCTCTCCCTGGGCCGTGAATCCGACAGTGCCAGCCAGGAGCGGCTGCAACGGATCGAGCGGGAACTGGCAGACCTGGGCG
AACAGCAAAGTTCCCTTAATGCCCAGTGGCAGCAGGAGAAAGGCGCGATCGATGAGCTGTCGTCGCTCAAGGAAGAGATC
GAACGGGTGCAGCTGCAGGTGGAACAGGCCAAACGCAGCTACGACCTCAACAAAGCGGCGGAACTGGAATACGGCACCCT
GGCCTCGCTGCAGAAGCAGTTGCTCGAACAGGAAACCCAGATTGCCTCAGAGGAGCCTGGCGAGAAAGGCTTGCTGCGGG
AAGAGGTGAGTGAAGACGACATCGCCGAGGTGATCGCCAAGTGGACCGGAATCCCAGTGGCGCGGCTGGTGCAGAGCGAA
ATGGAGAAGCTGCTGCAGCTGGAGGATGACCTGCATCAGCGGGTGATCGGCCAGCACAAGGCCGTCACCGCCGTCGCGGA
TGCAATTCAACGCTCCAGGGCTGGCCTGAGCGACCCGAATCGTCCGATCGCCAGCTTCCTGTTCCTCGGCCCCACCGGTG
TGGGCAAGACGGAACTCTCCAAGGCGCTCGCCAACCGGCTGTTCGACAGCGACGACGCCATGGTGCGCATCGACATGTCG
GAGTACATGGAGAAGCACACCGTGAGCCGTTTGATCGGGGCACCTCCCGGCTACGTGGGGTATGAGGCCGGTGGCCAGCT
CACCGAAGCGGTGCGTCGTCGGCCTTATGCCGTGATCCTGTTCGACGAGGTGGAGAAAGCCCACCCGGATGTCTTCAACG
TAATGCTGCAGATCCTCGATGACGGCCGTGTCACCGATGGGCAGGGCCGCACCGTGGACTTCACCAACACCGTGCTGATT
CTCACCAGCAACATCGGCAGCCAGTCGATCCTGGAGCTGGCCGGCGATCCCGAGCAGCATCGAGCAACAGAAAGCCGGGT
GAATGAGGCTCTCAGGGCCCATTTCCGGCCGGAATTCCTCAATCGCCTCGACGATCAGATCATCTTCCACAGCCTCAGGC
GGGCGGAACTGCGCCAGATCGTCACCCTCCAGGTGGAACGTCTGCGCCAGCGGCTGGCTGAGCGCAAGCTGGAGCTCAGC
CTGAGCGATGGGGCTGCCGACTGGCTTGCCAGTGCCGGATATGACCCCGTCTACGGGGCCCGACCACTGAAGCGGGCTGT
GCAACGGGAACTGGAGACTCCCATTGCCAAGCTGATCCTTTCCGGGCGACTGGGCGAGAACAGTGCCATCGCAGTTGACG
TCGATGGAGAGCAGCTCTCAATCGGATGA

Protein sequence :
MQPTAEQFTEQAWAAIIAAQQLAQSAKHQQLETEHLLLALLQQNGLAGRILSKAGVDVGNFQAAIDSHLRQQPSLGSPPE
SVFLGRSLNSCLDRAETARDGFSDSYIAIEHLLLALADDQRCGRQLLSQAGVDTSKLNEAITAVRGNQTVTDQNPEGTYE
SLEKYGRDLTAAARDGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQNRQLIA
LDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLDEH
RQHIEKDPALERRFQQVLVDQPTVEDTISILRGLKERYEVHHGVRIADSALVAAAVLSSRYIADRFLPDKAIDLVDESAA
RLKMEITSKPEEIDEIDRKILQLEMEKLSLGRESDSASQERLQRIERELADLGEQQSSLNAQWQQEKGAIDELSSLKEEI
ERVQLQVEQAKRSYDLNKAAELEYGTLASLQKQLLEQETQIASEEPGEKGLLREEVSEDDIAEVIAKWTGIPVARLVQSE
MEKLLQLEDDLHQRVIGQHKAVTAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMS
EYMEKHTVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNTVLI
LTSNIGSQSILELAGDPEQHRATESRVNEALRAHFRPEFLNRLDDQIIFHSLRRAELRQIVTLQVERLRQRLAERKLELS
LSDGAADWLASAGYDPVYGARPLKRAVQRELETPIAKLILSGRLGENSAIAVDVDGEQLSIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 9e-101 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 7e-101 43
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-103 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syncc9605_1007 YP_381320.1 ATPase VFG2076 Protein 1e-122 44
Syncc9605_1007 YP_381320.1 ATPase VFG2084 Protein 3e-110 41