|
Name : Cag_0695 (Cag_0695) Accession : YP_379009.1 Strain : Chlorobium chlorochromatii CaD3 Genome accession: NC_007514 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 967300 - 968580 bp Length : 1281 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATATTGCCTACATTCGCCAAAACCCTGATGAAGTAGCCGCTATGCTGCGCCATCGCCAGCTTGCAAGCGAAGA GCCGAAGCTGCAACAATTGCTTGAGTGCGATCGCCAGCGCAAAGAGTTGGTGCAGCGCTCCGACGAGCAAAAAGCGCTTC GCAACAAAGTTTCTAAAGAGGTTGCAGAAATAAAGAAAAAAGGGGTTGGTTCGCCCGATGAGCTTATCAGCCAAATGAAA GCTGTTTCGGATGCTATTACTGCAATGGATAGCCGTTTAAGCGAGCTTGAGGCGGAAATGGAAAATTTACTGCTTGCCCT GCCCAACAAGCTGCACCCATCCGTGCCCATTGGCAGAAGTGCTGAGGATAATATGGTGTTTGGTGAACCCGTTCATTTTG AGCACTCCCTCAATTTTCCGCTTAAAAATCATTTGGAGCTTGGCAAAGCGCTTCGCATTCTCGACTTTGAGCGTGGGGCA AAGGTAAGCGGTGCAGGTTTTCCCGTTTATGTTGGCAAAGGCGCACGGCTTGAACGGGCGCTCATTAACTTTATGCTCGA CATGCACACCGAGCAGCATGGCTACACCGAAGTGTTTCCTCCATTTTTAGTTAATCAAGAATCACTACGAGGCACGGGGC AGTGGCCTAAATTTGCCGACCAAGTCTATTACATTGGCGAAGACGATCTGTATGCCATCCCTACGGCTGAAGTGCCTCTC ACCAATTTGCATCGTGGTGAAATGGTAGAGACGAACGCGCTGCCAATTTCCTACACCGCTTACACCGCTTGCTTCCGCCG CGAAGCTGGAAGCTATGGTAAGGATACTCGAGGCTTTTTGCGTGTTCATCAGTTCAATAAGGTGGAGATGGTAAAATTCA CTCGCCCCGAAGATTCTTACACCGCATTAGAAGAAATTCGCCACCACGCCCAAGCCATTCTTGAAGCATTAAAAATTCCG TATCGCGTGCTGCTTTTGTGCAGTGGCGATATTAGCGCCAACGCCACCAAATGCTACGATATTGAAGTGTGGTCGCCCGC TGAAGAAAAATATCTTGAAGCCTCAAGTTGCTCAAACTTTGAAGAGTACCAAGCACGGCGCTCGAACATCCGCTTTAAAC CCGATAGCAAATCGAAGCCTGAATTTGTGCATACTTTAAACGGTTCAGGACTTGCCACATCGCGTTTAATGGTTTCCTTG TTGGAACATTATCAAACGGCTGATGGGCATATTCGTGTACCTAACGTTTTGCAACGTTACACAGGGTTTACTGAGATTTG A Protein sequence : MLDIAYIRQNPDEVAAMLRHRQLASEEPKLQQLLECDRQRKELVQRSDEQKALRNKVSKEVAEIKKKGVGSPDELISQMK AVSDAITAMDSRLSELEAEMENLLLALPNKLHPSVPIGRSAEDNMVFGEPVHFEHSLNFPLKNHLELGKALRILDFERGA KVSGAGFPVYVGKGARLERALINFMLDMHTEQHGYTEVFPPFLVNQESLRGTGQWPKFADQVYYIGEDDLYAIPTAEVPL TNLHRGEMVETNALPISYTAYTACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEDSYTALEEIRHHAQAILEALKIP YRVLLLCSGDISANATKCYDIEVWSPAEEKYLEASSCSNFEEYQARRSNIRFKPDSKSKPEFVHTLNGSGLATSRLMVSL LEHYQTADGHIRVPNVLQRYTGFTEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-85 | 46 |
