Gene Information

Name : Cag_0440 (Cag_0440)
Accession : YP_378756.1
Strain : Chlorobium chlorochromatii CaD3
Genome accession: NC_007514
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 515910 - 516587 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence :
ATGAGGCTTCTCATTATTGAAGATGAGCCCGGTATAGCGGCATTTCTTAAAGATGGGCTTGAGGAGGAATATTTTGCGGT
TGACTTAGCGTTTGATGGTAAAAGTGGGCTTGCTATGGCGTTAAGCAACGACTATGATGTGCTTATTGTGGATTGGATGA
TTCCCGCCTTAAGTGGCATTGAAGTATGCCGACAAGTGCGTAAAGCGGGCTGTTTGGTGCCAATCATTTTTTTAACGGCA
CGCGATACGCTTGAAGATGTGCTCTTTGGACTTGAAGCAGGCGCTAACGATTACATTAAAAAACCTTTTGCTTTTGAAGA
GCTACTTGCCCGCATTCGGGTGCAGTTGCGTAGCCGAACGCAAGGTGAGGAGAGTTTAAGTGCTGGTGGCGTAACGCTTA
ATCCTGCAACTCATCAAGTAACCTATAATGGCAGCGAACTCATTTTAACGCCAAAAGAGTTTGCACTGCTTGAATATCTG
CTGCGCAATAAAGATCGCGTCTGTACTCGGAGCCGCATTATTGAGCATGTGTGGGATATCCACTTTGATGCCGACACTTC
GGTAATTGATGTCTATATCACCTTTTTGCGCCGCAAGCTCGAAGCCGTTGGATGCAACAACTTCATTCAAACCATTCGAG
GCATTGGCTACATTATTCGCGAAGCAACCGCCTCATGA

Protein sequence :
MRLLIIEDEPGIAAFLKDGLEEEYFAVDLAFDGKSGLAMALSNDYDVLIVDWMIPALSGIEVCRQVRKAGCLVPIIFLTA
RDTLEDVLFGLEAGANDYIKKPFAFEELLARIRVQLRSRTQGEESLSAGGVTLNPATHQVTYNGSELILTPKEFALLEYL
LRNKDRVCTRSRIIEHVWDIHFDADTSVIDVYITFLRRKLEAVGCNNFIQTIRGIGYIIREATAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-36 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cag_0440 YP_378756.1 two component transcriptional regulator BAC0083 Protein 1e-39 46
Cag_0440 YP_378756.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 2e-43 45
Cag_0440 YP_378756.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 2e-43 45
Cag_0440 YP_378756.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 2e-43 45
Cag_0440 YP_378756.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 2e-43 45
Cag_0440 YP_378756.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 2e-43 45
Cag_0440 YP_378756.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 2e-43 45
Cag_0440 YP_378756.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 2e-43 45
Cag_0440 YP_378756.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 2e-43 45
Cag_0440 YP_378756.1 two component transcriptional regulator BAC0638 Protein 6e-35 45
Cag_0440 YP_378756.1 two component transcriptional regulator AE015929.1.gene1106. Protein 5e-40 44
Cag_0440 YP_378756.1 two component transcriptional regulator BAC0125 Protein 6e-37 43
Cag_0440 YP_378756.1 two component transcriptional regulator BAC0111 Protein 1e-38 43
Cag_0440 YP_378756.1 two component transcriptional regulator BAC0197 Protein 2e-36 42
Cag_0440 YP_378756.1 two component transcriptional regulator BAC0308 Protein 9e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cag_0440 YP_378756.1 two component transcriptional regulator VFG1390 Protein 5e-45 45
Cag_0440 YP_378756.1 two component transcriptional regulator VFG0596 Protein 8e-37 42