Gene Information

Name : Cag_0382 (Cag_0382)
Accession : YP_378698.1
Strain : Chlorobium chlorochromatii CaD3
Genome accession: NC_007514
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 441231 - 442826 bp
Length : 1596 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAGTAAAGCTCCATTATTTGAAAAAATAAGCGTTAAAGGTACCCTTTTCCCAATTGAGGTAAGCATGAAGCGCTTACA
CCTCAGCCACCCCTACACCTGCAACGGGCAGGAATTTTCCTCCCTCCCAATGTACGACACCAGCGGCTTGCATGGCGATT
GCCGCACGCAGGTTGATCCGCATGTGGGGTTGCCGCCCCTTCGCTCATCGTGGAATTTTCCGCGCACAGTGCAGCTTGGC
GTTGCCCAAACGCAAATGCACTACGCTCGCAAAGGAGTTATTACGCCCGAAATGGAGTATGTGGCAATCCGCGAAAATCA
GCAATTGGAAGAGTGGATTCGCTCCTTTAACCGTCATGGAAAAAAAGTTGAACCCATTACACCCGAATTTGTGCGGCAGG
AAATTGCTGCTGGACGTGCCATAATTCCAGCAAATCTTAAACATCCCGAACTTGAACCCATGATTATTGGGCGCCATTTT
CGGGTAAAAATTAACTCCAACATTGGCAACTCAGCCATGGGCTCTTCAATTGAGGAGGAGGTTGAAAAAGCGGTGTGGTC
GTGCCGTTGGGGTGCTGATACGGTAATGGATTTAAGCACGGGGGCAAACATTCACCAAACGCGCGAATGGATTTTACGCA
ACTCTCCCGTTCCCATTGGCACCGTGCCTGTTTATCAAGCGCTTGAAAAAGCGGGCGGCAAAGCTGAAAATTTAACGTGG
GAACTTTACCGCGACACCTTGATTGAACAAGCCGAGCAAGGGGTTGACTACTTCACCATCCACGCAGGCATTTTGCAGGA
ACACCTTCCCTACGCCGAGCGCCGCTTAACGGGCATTGTATCGCGCGGAGGTTCCATTATGGCAACATGGTGCCGCCACC
ACCAGCAGGAAAACTTCCTTTACACCCACTTTAACGACATTTGTGAGATTCTAAAATCATACGACATTGCCGTATCGTTA
GGCGATGCGCTCCGTCCTGGCTCTATTTTGGATGCTAATGACGAAGCACAATTTGGCGAGCTGAAAGTACTGGGCGAACT
CACCAAACAAGCATGGCAGCATGAGGTGCAGGTAATGATTGAAGGACCAGGGCATGTGCCTCTCAATTTGATTGAGGAGA
ACATGCAAAAAGAGCTTGAACTCTGCTACGAAGCACCGTTTTACACGCTCGGACCGCTTATTACCGATATTGCCGCAGGG
TACGACCACATCAATTCCGCAATTGGCGGCGCCCTGCTTGCCAGCCTTGGATGCTCCATGCTCTGCTACGTAACCCCAAA
AGAGCACCTTGGTTTGCCCGACCGCAACGATGTTCGCGAAGGGGTAATTGCCCACAAAGTAGCCGCACATGGTGCCGATA
TTGCACGAGGCAACCCAACAGCATGGCTTCGTGATACATTAATGAGCCAAGCTCGTTACTCCTTTGCGTGGGAAGATCAA
TTTAACCTCTCGCTTGACCCCGAAAAAACACGCGCCGTCCATTCGCAAAGCATAGCCGCCAGCGGTTACAGCGCCCCCAA
CCCCGACTTTTGCACCATGTGCGGTCCCGATTTTTGTTCCATGAAGCGCACCCAAAAGATGGGGAAAGGGAACTAA

Protein sequence :
MSKAPLFEKISVKGTLFPIEVSMKRLHLSHPYTCNGQEFSSLPMYDTSGLHGDCRTQVDPHVGLPPLRSSWNFPRTVQLG
VAQTQMHYARKGVITPEMEYVAIRENQQLEEWIRSFNRHGKKVEPITPEFVRQEIAAGRAIIPANLKHPELEPMIIGRHF
RVKINSNIGNSAMGSSIEEEVEKAVWSCRWGADTVMDLSTGANIHQTREWILRNSPVPIGTVPVYQALEKAGGKAENLTW
ELYRDTLIEQAEQGVDYFTIHAGILQEHLPYAERRLTGIVSRGGSIMATWCRHHQQENFLYTHFNDICEILKSYDIAVSL
GDALRPGSILDANDEAQFGELKVLGELTKQAWQHEVQVMIEGPGHVPLNLIEENMQKELELCYEAPFYTLGPLITDIAAG
YDHINSAIGGALLASLGCSMLCYVTPKEHLGLPDRNDVREGVIAHKVAAHGADIARGNPTAWLRDTLMSQARYSFAWEDQ
FNLSLDPEKTRAVHSQSIAASGYSAPNPDFCTMCGPDFCSMKRTQKMGKGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 3e-159 59
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 3e-159 59
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 3e-155 58