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Name : Cag_1317 (Cag_1317) Accession : YP_379620.1 Strain : Chlorobium chlorochromatii CaD3 Genome accession: NC_007514 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1783423 - 1786044 bp Length : 2622 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGCGAAAGAACAAAGCGGCACCAAAGAACATTCGCCAATGATGCGGCAATATTTGGAGGTTAAGGAGCGTTACCCCGA TTATTTGCTACTCTTTCGCGTTGGCGACTTTTACGAAACCTTTTTTGATGATGCCATTACGGTATCTACTGCACTGAATA TTGTACTTACCAAGCGCACTGCCGATATTCCTATGGCAGGCTTTCCTTACCATGCAAGCGAAGGGTACATTGCAAAGCTT ATTAAAAAAGGCTACAAGGTTGCCGTGTGCGATCAGGTGGAAGACCCTGCTGATGCTAAAGGTATTGTGCGGCGTGAAAT TACCGACATTGTTACACCGGGTGTTACCTACAGCGATAAGTTGCTTGACGATCGCCATAATAATTATTTGGCAGGCGTTG CTTTTCTGAAAGAGGGCAAAACATTGATGGCGGGTGTGGCGTTTATTGATGTTACTACGGCGGAGTTCCGCATAACCACC CTTCTCCCCGAAGAGCTACCGCACTTTCTTGCAGGGCTGCATCCATCCGAAATTCTCTTCTCTACCCAAGAAAAAGAGCG CACGCTACTGCTTAAAAAATCATTGCCAAGTGAAACACTCATCTCCTTGCTTGAGCCATGGATGTTTAGCGAAGAGCAAA GCCAAACGGTGCTGTTGCGCCATTTTAAAACTCATTCGTTAAAAGGGTTTGGCATTGAAACTGCGGGGGGAAATCGTGCA GCGTTAGTAGCCGCGGGGGTAATTTTGCAATACCTTGAAGAGACGCGCCAAAACAGCTTGAGCTACATTACGCGCATTGG TGAGCTGCACCACACCGAGTTTATGAGCCTTGACCAGCAAACCAAGCGCAATTTGGAGATTATCTCCTCCATGCAGGATG GTTCGCTTAGCGGTAGTTTGTTGCAAGTGATGGATCGCACGCGTAACCCTATGGGGGCACGATTGCTGCGCCGCTGGCTT CAGCGACCGCTAAAAAAGCTTACCAACATTCAAGAGCGCCACAATGCGGTTGAAGAACTTGTGGAAAATCGCACACTCCG CGAAAGCGTGGCAGAGCAGCTTGCCGCCATTAACGACCTTGAGCGCTCCCTTGCACGCATTGCCACGCTGCGCACCATTC CGCGCGAAGTGCGCCAACTTGGCATATCGCTTGCGGCTATTCCCACCTTGCAAGCCTTACTTTCAGACGTTACAGCTCCT CGCTTGCAAGCACTGACCGCCGCACTTCAGCCACTGCCCAAACTTGCCGAGCAAATTGAAAGCGCCATTGATCCCGATGC AGGTGCAACCATGCGCGACGGCGGCTACATTCGAGCGGGTTATAATGAGGAATTGGACGACCTTCGTTCAATCGCGTCAA CCGCAAAAGATCGCCTCATGCAGATTCAGCAAGAGGAGCGCGAAGCTACCGCTATCTCATCGCTGAAGGTAAGCTACAAC AAAGTGTTCGGCTACTATATTGAAATTAGCCGCGCCAACAGCGACAAGGTTCCAGCTTACTACGAAAAAAAGCAAACCCT TGTTAATGCCGAGCGCTACACCATTCCCGCATTAAAAGAGTACGAAGAGAAAATTCTCCATGCCGAAGAAAAAAGCCTTT TGCTTGAAGCGGAGCTTTTTAGGAACCTCTGCCAACAAATTGCCACTGAAGCGGCTACCGTGCAAGCCAATGCAGCGCTC CTTGCTGAATTAGACGCACTCTGCTCATTTGCTGAATGCGCCGTAGCGTTCGATTACACCAAACCCACCATGCACGAAGG CACCACGCTCTCCATTACCGCTGGACGCCATCCCGTGCTGGAACGCTTGCTCGGTGCCGAAGAGAGCTACATTCCAAACG ATTGCCATTTTGATGACAAGCAAACCATGCTCATTATTACGGGACCCAACATGGCAGGCAAAAGCTCTTATTTACGTCAA ATTGGCTTAATTGTGCTGCTTGCTCAAGCAGGTAGCTTTGTGCCCGCCGAAAGCGCTTCTCTTGGTGTGGTGGATAGAAT TTTTACGCGCGTTGGCGCTTCCGATAATCTTACATCGGGCGAAAGCACCTTTCTTGTAGAGATGAATGAAGCCGCAAACA TTCTCAATAACGCCACCGAACGGAGCTTGCTGTTACTTGATGAAATTGGACGAGGCACCAGCACTTTTGACGGCATGTCT ATTGCATGGTCAATGTGCGAATACATTGTCCACACCATTGGCGCTAAAACGCTTTTTGCTACCCACTACCACGAATTAGC CGAACTTGAAGAGCGCTTAAAAGGTGTAGTGAACTATAACGCCACCGTTGTTGAAACCGCTGAAAGAGTAATTTTTTTAC GGAAAATTGTACGAGGCGCCACCGACAACAGTTACGGCATTGAAGTTGCTAAAATGGCAGGAATGCCTAACGACGTAATT AGCCGAGCACGCGAAATTCTTGCAGGACTTGAAAAACGCGATGTTGAAATTCCCCGCCAAAAAGCACCAAAAGTAAACAC CATGCAAATCAGCCTCTTTGAAGAAACCGACAACCAACTTCGTAACGCCGTTGAAGCTGTGGACGTCAATCGTTTAACGC CGCTTGAAGCGCTGTTAGAGTTACAGAAATTGCAAGAGATGGCACGGAGTGGAGGGTATTGA Protein sequence : MAKEQSGTKEHSPMMRQYLEVKERYPDYLLLFRVGDFYETFFDDAITVSTALNIVLTKRTADIPMAGFPYHASEGYIAKL IKKGYKVAVCDQVEDPADAKGIVRREITDIVTPGVTYSDKLLDDRHNNYLAGVAFLKEGKTLMAGVAFIDVTTAEFRITT LLPEELPHFLAGLHPSEILFSTQEKERTLLLKKSLPSETLISLLEPWMFSEEQSQTVLLRHFKTHSLKGFGIETAGGNRA ALVAAGVILQYLEETRQNSLSYITRIGELHHTEFMSLDQQTKRNLEIISSMQDGSLSGSLLQVMDRTRNPMGARLLRRWL QRPLKKLTNIQERHNAVEELVENRTLRESVAEQLAAINDLERSLARIATLRTIPREVRQLGISLAAIPTLQALLSDVTAP RLQALTAALQPLPKLAEQIESAIDPDAGATMRDGGYIRAGYNEELDDLRSIASTAKDRLMQIQQEEREATAISSLKVSYN KVFGYYIEISRANSDKVPAYYEKKQTLVNAERYTIPALKEYEEKILHAEEKSLLLEAELFRNLCQQIATEAATVQANAAL LAELDALCSFAECAVAFDYTKPTMHEGTTLSITAGRHPVLERLLGAEESYIPNDCHFDDKQTMLIITGPNMAGKSSYLRQ IGLIVLLAQAGSFVPAESASLGVVDRIFTRVGASDNLTSGESTFLVEMNEAANILNNATERSLLLLDEIGRGTSTFDGMS IAWSMCEYIVHTIGAKTLFATHYHELAELEERLKGVVNYNATVVETAERVIFLRKIVRGATDNSYGIEVAKMAGMPNDVI SRAREILAGLEKRDVEIPRQKAPKVNTMQISLFEETDNQLRNAVEAVDVNRLTPLEALLELQKLQEMARSGGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 2e-134 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cag_1317 | YP_379620.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 8e-143 | 43 |
