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Name : Cag_1124 (Cag_1124) Accession : YP_379429.1 Strain : Chlorobium chlorochromatii CaD3 Genome accession: NC_007514 Putative virulence/resistance : Unknown Product : Type I site-specific deoxyribonuclease HsdR Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 1515437 - 1518691 bp Length : 3255 bp Strand : + Note : - DNA sequence : ATGATACATCTCACCGAACATAGCATAGAAACATTTGCCATTGAGTTACTCTATAAACTCGGCTACGAATATATCTATGC TCCCGATATTGCGCCCGACACTTCGGCAGGCTCAGTGTCCGAGATTCGAGAGAGCTTCGCACAAGTTCTATTGTTGAACA GGTTGCAAAATGCCGTTAAAAGAATCAATCACAGTATCCCAGCCGATGCACAGGCAGAAGCTATCAAAGAAATTCAACGC ATTGCTTCGCCTGAATTGCTTACCAACAATGAAACCTTTCACCGTTTACTTACTGAAGGTATTCCCGTTTCAAAACGTGT AGATGGAGACGATAGGGGCGACAGAGTGTGGCTCATTGATTTTAAAAATCCCCACAATAACGAATTTGTTGTAGCCAATC AATTTACCATTATTGAAAACGGAAATAACAAACGCCCTGATGTGATTCTGTTTGTCAATGGAATTCCGCTTGTAGTTATT GAACTAAAAAATGCTACCTATGAAAATACCACAATGCATTCAGCATTTAAGCAAATAGACACCTATAAAAAAACTATTCC AAGTTTATTTACGTATAACGGTTTTATCGTTATCTCTGATGGTTTAGAAGCCAAAGCAGGCACTATTTCGTCAGGTTTTA GTCGCTTTATGGCATGGAAGTCGGCAGATGGTAAAGCTGAAGCCTCGCATTTAGTAAGCCAATTAGAAACATTGATTCAA GGAATGTTGAATAAAGAAACCTTGATAGACTTAATGAGGCATTTCATTGTATTTGAAAAATCAAAAAAGATAGACGCTAA AACAGGTATTACAACAATATCAACCGTTAAAAAATTAGCAGCTTATCATCAATACTATGCAGTAAATCGAGCAGTTGAGT CAACGTTAAGAGCGTCAGGTTATCAATTGGTGAAAGAAACGCCATTGAGTATGGTCATGGAATCTCCTGAAAGCTATGGT TTGCGTGGAGTAAAGAAGCAACCCATTGGCGACAAAAAAGGTGGTGTGGTTTGGCATACGCAAGGTAGCGGAAAATCACT CTCAATGGTTTTCTATACTGGTAAAATTGTATTGGCTTTAGACAACCCAACCATTCTTGTAATTACCGACCGAAACGATT TGGACGACCAACTTTTTGACACGTTTGCTGCATCAAAACAATTAATAAGGCAAGAACCAGTTCAGGCAGAAGACAGAAAC CAGTTAAAAGAATTATTAAAAGTTGCTTCGGGCGGTGTAGTATTTACAACCATTCAAAAATTTCAACCCAATGAAGGCAA CATTTATGAAAAGCTTTCTGATAGAAAAAACATTGTAGTTATAGCGGACGAAGCACATAGAACACAATACGGATTTAAAG CAAAAACCATTGATGCAAAAGATGAAAAAGGGACGATTATTGGCAAGAAAATCGTTTACGGTTTTGCCAAATATATGCGA GATGCTTTGCCAAACGCAACTTATTTAGGTTTTACAGGAACGCCGATAGAAAACACCGATGTAAACACACCAGCCGTTTT CGGAAACTATGTGGACATTTACGATATAGCTCAAGCCGTTGAAGATGGAGCAACCGTTCGTATTTATTACGAAAGCCGTT TAGCAAAAGTAAGTCTTAGCGAAGAAGGCAAAAAATTAGTTGCCGAACTTGATGATGAATTGGAAGAGGAAGAAGATGTA AGGGCGTATAGCAATACGCCCCAACAAAAAGCAAAAGCTAAATGGACGCAGCTTGAAGCCTTAGTTGGTAGTGAAAACCG AATTAGGAATATTGCCAAAGACATTGTTGCACACTTTAACCAACGGCAGGAAGTATGTAATGGTAAAGGTATGATTGTTG CTATGAGCCGCAGAATTGCAGCCGATTTGTATCAGGCAATTATTAACCTAAAACCTGAATGGCATTCAGAGGATTTGAAT AAAGGCGTGATAAAAGTGGTAATGACTTCGGCATCTTCTGATGGTCCAAAAATTTCAAAACACCACACAACTAAAGAGCA AAGAAGAACCTTAGCCGAAAGAATGAAAAATCCTGATGACGCATTACAATTGGTAATTGTGCGGGATATGTGGCTTACTG GTTTTGACGCACCAAGTATGCACACCCTTTATATTGATAAACCAATGAAAGGGCATAATTTGATGCAAGCAATTGCCCGT GTTAATCGAGTTTATAACGATAAACCCGGTGGTTTAATTGTTGACTATTTAGGCATTGCTTCTGATTTAAAAAAAGCACT TGCTTTTTATTCTGATGCAGGCGGAAAAGGCGACCCAACCATATTGCAAGAACAAGCCGTTCAATTGATGTTGGAGAAAT TAGAAGTAGTTTCTCAAATGTATTACGGCTTTGCATATGAAACCTATTTTGAAGCCGACACTTCAAAGAAATTATCGCTA ATACTTGCAGCCGAAGAACATATTTTAGGTTTAGAAGACGGAAAGAAACGTTACATCAACGAAGTAACAGCACTTTCAAA AGCATTTGCCATTGCTATACCGCATGACCAAGCAATGGATGTAAAAGATGAGGTTTCGTTTTTCCAAACGGTAAAAGCAA GGTTAGCAAAGTTTGACGGAACCGGGTCAGGCAAAACAGACGAAGAAATTGAAACAACCATTCGACAAGTTATTGACAAA GCACTCATTTCGGAACAAGTGATTGATGTGTTTGACGCAGCAGGAATAAAGAAACCCGATATTTCTATTCTTTCAGAAGA TTTTTTAATGGAACTGAAAGGAATGGAACATAAAAATGTTGCCTTAGAAGTTTTGAAAAAACTCTTGAATGATGAAATAA AATCGAGAGCAAAAAAGAACCTCGTAAAAAGTAGAACATTTTTAGATATGTTGGAAAACTCCATTAAAAAATATCATAAC AAAATTCTTACGGCTGCCGAAGTTATTGATGAACTCATAAAACTTGGGAAAGAAATAGTTGAAACGGATGATGAAGCAAA ACGTATGGGTTTAACTGATTTTGAATATGCTTTTTATACCGCAGTTGCCAATAATGATAGCGCAAAAGAACTCATGCAAC AAGATAAATTGAGAGAACTTGCGATTGTACTAACCGAAACCATACGCCAAAACACATCTATTGACTGGACAATTAAAGAA AGCGTAAAGGCTAAATTGAAAGTAGCGGTAAAAAGAGTGCTCAGAAAATATGGCTATCCACCCGACATGCAATTGTTAGC AACAGAAACCGTATTAAAACAAGCTGAAATGATTGCTAATGAAATAACAAAATAA Protein sequence : MIHLTEHSIETFAIELLYKLGYEYIYAPDIAPDTSAGSVSEIRESFAQVLLLNRLQNAVKRINHSIPADAQAEAIKEIQR IASPELLTNNETFHRLLTEGIPVSKRVDGDDRGDRVWLIDFKNPHNNEFVVANQFTIIENGNNKRPDVILFVNGIPLVVI ELKNATYENTTMHSAFKQIDTYKKTIPSLFTYNGFIVISDGLEAKAGTISSGFSRFMAWKSADGKAEASHLVSQLETLIQ GMLNKETLIDLMRHFIVFEKSKKIDAKTGITTISTVKKLAAYHQYYAVNRAVESTLRASGYQLVKETPLSMVMESPESYG LRGVKKQPIGDKKGGVVWHTQGSGKSLSMVFYTGKIVLALDNPTILVITDRNDLDDQLFDTFAASKQLIRQEPVQAEDRN QLKELLKVASGGVVFTTIQKFQPNEGNIYEKLSDRKNIVVIADEAHRTQYGFKAKTIDAKDEKGTIIGKKIVYGFAKYMR DALPNATYLGFTGTPIENTDVNTPAVFGNYVDIYDIAQAVEDGATVRIYYESRLAKVSLSEEGKKLVAELDDELEEEEDV RAYSNTPQQKAKAKWTQLEALVGSENRIRNIAKDIVAHFNQRQEVCNGKGMIVAMSRRIAADLYQAIINLKPEWHSEDLN KGVIKVVMTSASSDGPKISKHHTTKEQRRTLAERMKNPDDALQLVIVRDMWLTGFDAPSMHTLYIDKPMKGHNLMQAIAR VNRVYNDKPGGLIVDYLGIASDLKKALAFYSDAGGKGDPTILQEQAVQLMLEKLEVVSQMYYGFAYETYFEADTSKKLSL ILAAEEHILGLEDGKKRYINEVTALSKAFAIAIPHDQAMDVKDEVSFFQTVKARLAKFDGTGSGKTDEEIETTIRQVIDK ALISEQVIDVFDAAGIKKPDISILSEDFLMELKGMEHKNVALEVLKKLLNDEIKSRAKKNLVKSRTFLDMLENSIKKYHN KILTAAEVIDELIKLGKEIVETDDEAKRMGLTDFEYAFYTAVANNDSAKELMQQDKLRELAIVLTETIRQNTSIDWTIKE SVKAKLKVAVKRVLRKYGYPPDMQLLATETVLKQAEMIANEITK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 44 |
