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Name : Cag_1120 (Cag_1120) Accession : YP_379425.1 Strain : Chlorobium chlorochromatii CaD3 Genome accession: NC_007514 Putative virulence/resistance : Unknown Product : type I restriction-modification system specificity subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 1510560 - 1512143 bp Length : 1584 bp Strand : + Note : - DNA sequence : ATGGCAAAACAAAAAGCAACCCTTCGGCAAACTCAGGGAAAACAGGAAGAACCTTTAGAAAAACAGCTTTGGAAAACCGC CGACAAACTCCGCAAGAACATTGATGCGGCAGAATACAAACACATTGTGTTAGGGTTAATCTTCTTGAAATATATTTCTG ATTCATTTGAAGAACTCTATGCAAAGCTACAAGCAGAGGAAGCAAACGGAGCAGACCCCGAAGACAAAGATGAATACAAA GCTGAAAATGTATTCTTTGTTCCGCAGGATGCACGATGGAATTATTTGCAATCGAAAGCAAAACAACCTGAAATTGGAAA GTTTGTGGACGATGCAATGGATGTTATAGAAAAAGAAAATGCTTCACTAAAAGGAGTTTTACCAAAAGTATTTGCCCGAC AAAATCTTGATCCAACAAGTTTGGGCGAACTGATTGACTTGGTTGGAAACATTGCCTTAGGTGATGCAAAAGCAAGAAGT GCCGATGTGCTTGGGCATGTTTTTGAATATTTCTTAGGTGAGTTTGCTCTTGCAGAAGGCAAAAAAGGTGGGCAGTTTTA TACGCCAAGAAGCGTTGTAGAATTATTGGTTGAAATGTTGGAGCCATACAAAGGAAGAGTTTTTGACCCTTGCTGTGGTT CGGGTGGAATGTTTGTTCACTCCGAAACGTTTGTAACAGAGCACCAAGGGAAAGTAAACGACATCTCTATTTACGGGCAG GAAAGCAACCAAACAACGTGGCGCTTATGCAAAATGAACCTTGCGATTCGAGGTATTGATAGCTCACAAGTGAAATGGAA CAACGAAGGCTCTTTTTTAAACGATGCACATAAAGACCTGAAAGCCGATTACATTATTGCTAATCCACCATTCAACGTGA GTGATTGGGGTGGTGATTTAATGCGAAGCGATGGACGTTGGCAATATGGTACGCCACCAACAGGCAATGCCAACTTTGCA TGGATGCAACATTTTATTTACCACTTAGCACCCAATGGACAAGCAGGTGTTGTATTAGCAAAAGGTGCTTTAACATCTAA AACTTCAGGTGAAGGCGATATACGAAAAGCATTAGTTGAAAACGGTTTGATTGATTGTATTGTAAACCTGCCTGCCAAGT TGTTTTTAAATACACAGATTCCTGCTGCCTTATGGTTTCTTCGTAGAGATGCAAAATTTTTCGTCTCTACAAATGGAAAA TTTCGCGACCGAAGCAATGAAATATTATTTATTGATACCCGAAACTTAGGGCATTTAATAAATCGCAGAACCCGTGAACT ATCAAAGGAAGACATATATAAAATCGCCAGCACTTACCACGCATGGAGAACGCTGCCTGAGGCTCTCAATGGCAGCGCCT ATGCAGATATCCTTGGCTTTTGTGCATCCGTTGCCATAAGCAAAGTAGCCGAATTGGATTATGTGCTTACGCCAGGACGT TATGTAGGCTTACCCGATGATGAAGATGATTTTGATTTTGCGGAACGTTTTACAGCGTTAAAAGCCGAGTTGGAAATGCA ATTGCAAGAAGAAGCTCAACTGAATGCAGTGATTTCCGCTAACCTTTTAAAGATTAAGTATTGA Protein sequence : MAKQKATLRQTQGKQEEPLEKQLWKTADKLRKNIDAAEYKHIVLGLIFLKYISDSFEELYAKLQAEEANGADPEDKDEYK AENVFFVPQDARWNYLQSKAKQPEIGKFVDDAMDVIEKENASLKGVLPKVFARQNLDPTSLGELIDLVGNIALGDAKARS ADVLGHVFEYFLGEFALAEGKKGGQFYTPRSVVELLVEMLEPYKGRVFDPCCGSGGMFVHSETFVTEHQGKVNDISIYGQ ESNQTTWRLCKMNLAIRGIDSSQVKWNNEGSFLNDAHKDLKADYIIANPPFNVSDWGGDLMRSDGRWQYGTPPTGNANFA WMQHFIYHLAPNGQAGVVLAKGALTSKTSGEGDIRKALVENGLIDCIVNLPAKLFLNTQIPAALWFLRRDAKFFVSTNGK FRDRSNEILFIDTRNLGHLINRRTRELSKEDIYKIASTYHAWRTLPEALNGSAYADILGFCASVAISKVAELDYVLTPGR YVGLPDDEDDFDFAERFTALKAELEMQLQEEAQLNAVISANLLKIKY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 7e-134 | 58 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 1e-133 | 58 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 4e-132 | 57 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 3e-105 | 46 |
