Gene Information

Name : Syncc9902_1265 (Syncc9902_1265)
Accession : YP_377273.1
Strain : Synechococcus sp. CC9902
Genome accession: NC_007513
Putative virulence/resistance : Virulence
Product : glutamine synthetase type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1229454 - 1230875 bp
Length : 1422 bp
Strand : +
Note : -

DNA sequence :
ATGGCCAAAACCCCTCAGGAGGTCCTTCGTCAAATCAAGGACGAAGGCATAGAGCTGATTGATCTCAAATTCACTGACCT
TCACGGCAAGTGGCAGCACCTGACGGTGTGCACTGACTTACTGGAGGAAGAGTCGTTCACCGAAGGACTGGCCTTCGATG
GATCCTCCATTCGTGGATGGAAGGCCATTAACGCCTCGGATATGGCGATGGTGCCTGATCCAAGTTCCGCCTGGATCGAT
CCGTTTTACCGCCATAAAACCTTGAGCATGATTTGCTCAATTCAGGACCCTCGCACCGGTCAGGATTACGACCGTTGTCC
TCGAGCACTGGCGCAACGCGCTCTCAACCATCTCAACAACACCGGACTTGCCGACACGGCGTTTTTCGGCCCAGAGCCTG
AGTTTTTCATCTTCGACGACGTTCGCTACAACTCGTCGGAAGGTGGATCCTTCTACAGCGTTGACACAATTGAGGCCGGC
TGGAACACAGGCCGCATCGAAGAAGGCGGCAACCTCGCGTACAAAATCCAAACCAAAGAGGGCTACTTCCCGGTTGCTCC
AAATGACACAGCTCAGGACATTCGTTCCGAAATGCTGCTGCTCATGGCCCAACTTGGAATTCCCATTGAGAAGCACCATC
ACGAAGTTGCCGGTGCGGGTCAACACGAACTGGGCATGAAGTTCGCGCAGCTGATTGAAGCTGCCGACAACGTCATGACC
TACAAGTACGTCGTACGGAACGTTGCCAAGAAATACGGCAAAACAGCCACCTTTATGCCGAAGCCGGTGTTTAACGACAA
CGGCACAGGCATGCACGTTCACCAAAGCCTGTGGAAGGGTGGTGAACCTTTGTTTTTCGGTGAAGGCACCTACGCCAACC
TGTCCCAGACAGCGCGTTGGTACATCGGTGGCATTTTGAAGCATGCGCCGGCATTCCTCGCCTTTACCAACCCAACCACC
AACAGCTACAAGCGCCTGGTTCCAGGTTTCGAAGCTCCGGTGAATTTGGTGTATTCCGAGGGCAACCGCTCTGCTGCTGT
TCGCATTCCCCTGACAGGTCCAAGCCCGAAAGCCAAACGCTTGGAGTTCCGCTCAGGTGATGCCCTCGCCAATCCCTACT
TGGCCTTCAGCGCGATGATGATGGCCGGTTTAGACGGCATCAAAAATCAAATCGATCCCGGCGATGGCGAAGATCGTGAC
TTGTTCGAGCTAAGTGCTGAAGAACTGCAGAAGATCTCAACGGTGCCACCTTCTTTAAATGGTGCACTAGAGGCCCTAAG
TGCTGATCGCGCCTTCTTGACTGAAGGTGGCGTCTTCACCGACGACTTCATCGACAACTGGATCGACCTCAAATACGAGG
AAGTTCAGCAACTGCGCCAGCGCCCACACCCGCACGAATTCACCATGTACTACGACGCCTGA

Protein sequence :
MAKTPQEVLRQIKDEGIELIDLKFTDLHGKWQHLTVCTDLLEEESFTEGLAFDGSSIRGWKAINASDMAMVPDPSSAWID
PFYRHKTLSMICSIQDPRTGQDYDRCPRALAQRALNHLNNTGLADTAFFGPEPEFFIFDDVRYNSSEGGSFYSVDTIEAG
WNTGRIEEGGNLAYKIQTKEGYFPVAPNDTAQDIRSEMLLLMAQLGIPIEKHHHEVAGAGQHELGMKFAQLIEAADNVMT
YKYVVRNVAKKYGKTATFMPKPVFNDNGTGMHVHQSLWKGGEPLFFGEGTYANLSQTARWYIGGILKHAPAFLAFTNPTT
NSYKRLVPGFEAPVNLVYSEGNRSAAVRIPLTGPSPKAKRLEFRSGDALANPYLAFSAMMMAGLDGIKNQIDPGDGEDRD
LFELSAEELQKISTVPPSLNGALEALSADRAFLTEGGVFTDDFIDNWIDLKYEEVQQLRQRPHPHEFTMYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-102 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syncc9902_1265 YP_377273.1 glutamine synthetase type I VFG1399 Protein 1e-125 56