Gene Information

Name : Syncc9902_1011 (Syncc9902_1011)
Accession : YP_377019.1
Strain : Synechococcus sp. CC9902
Genome accession: NC_007513
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 985751 - 986518 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCGACGCCGATCAACTCTGTGTTGACTACAACGGCACGGTGGCGCTGTATGACGCCAGTCTCCATTTGCCCGC
TGGTTGTATATGTGGTCTTGTCGGGATGAATGGGGCTGGTAAGTCCACCTTGTTTAAGGCCCTAACAGGCTTCGTCCGAC
CTTCTCGGGGCTTGATTCGCATCAATGGCCGCAGTGTCAAAGAAGCCCAGCGTGAGCAAGCCGTTGCCTACGTCCCACAG
AGCGAGGGAATCGATTGTCAGTTTCCTGTCTCGGTTTGGGATGTGGTGATGATGGGTCGCTATGGCGCGATGAATTTCCT
CAGGATTCCACGTGGGTCCGATCGTGTAGCCGTTCGACATGCCCTGGAACGAGTTGAGTTGTTGGAACTGCGCAACCGAC
CGATCGGCACCCTTTCCGGTGGTCAACGCAAGCGTGCATTTTTGGCTCGTGCCATTGCGCAGAGAGCAGATGTTCTTTTG
TTGGATGAGCCTTTTAATGGAGTAGATGTAAGAACTGAGAAATTAATGGCCCAGTTATTTATTCAGTTTCGTGAAGAAGG
TCGTACGATTTTGATTTCCACCCACGACCTCAGTCATGTGCGTGATTTCTGTGATTCAGTTGTCTTGATTAATAAAACTG
TTCTTGCCTATGGTGAAACGTCTGAAGTCTTTACTCCTGAGAATCTTGCTATGACCTTCGGAGGATTTCCTCCCAATTTG
TTAACGGGTCATAGTTCTCCGGGTGATTCTGTCGAACCCTTGAATTAA

Protein sequence : 
MRIDADQLCVDYNGTVALYDASLHLPAGCICGLVGMNGAGKSTLFKALTGFVRPSRGLIRINGRSVKEAQREQAVAYVPQ
SEGIDCQFPVSVWDVVMMGRYGAMNFLRIPRGSDRVAVRHALERVELLELRNRPIGTLSGGQRKRAFLARAIAQRADVLL
LDEPFNGVDVRTEKLMAQLFIQFREEGRTILISTHDLSHVRDFCDSVVLINKTVLAYGETSEVFTPENLAMTFGGFPPNL
LTGHSSPGDSVEPLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-50 56
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-50 56
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-50 56
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-51 56
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-51 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syncc9902_1011 YP_377019.1 ATPase BAC0350 Protein 1e-50 56
Syncc9902_1011 YP_377019.1 ATPase BAC0440 Protein 2e-57 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syncc9902_1011 YP_377019.1 ATPase VFG0526 Protein 1e-50 56