Gene Information

Name : Bcep18194_A3984 (Bcep18194_A3984)
Accession : YP_368227.1
Strain :
Genome accession: NC_007510
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein CapD
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : 5.1.3.2
Position : 909269 - 911152 bp
Length : 1884 bp
Strand : +
Note : -

DNA sequence : 
ATGTTGCGATCCAAAGCATCATGGCTGTCACTCAGTGCTTTCCTGTTCGATCTGCTGGCGGTTGTCGTCGCGTGGTTGTT
CGCCTATCTTGTTCGCTTCAACGGTAGCGTTCCGCCCGATTTCCTGAGGGGTTCGCTGACTGCGCTCGCCTGGGTGCTTC
CCGTCTATGCGCTGACGTTCCACCTGTTCGGCCTGTATCGCGGACTGTGGGTGTTCGCGAGCCTGCCGGACCTGGTGCGG
ATTTCGAAGGCGCTTGCGGGCGGCGGCGTGATTGTGATGATCGGCGCCGTGATGTTCCAGCCGTCGCCGATCATCCCGCG
TTCCGTGCTGCTGGTCTCCCCGCTGATGCTGTTCCTGATGATGGGCGGCGCTCGTGCGCTGTATCGCGCGATGAAGGAGT
TTTACCTGTACGGCGGCCTCGTCGGGCAGGGCAAGCCGGTGCTCGTGATCGGCGCGGGCACGGCAGGCGCGAACCTGGCG
CGCGAATTGTCGCGCTCGGGCGAATGGCGTCTCGTCGGCCTGCTGGATGACGACCAGACGAAGCAGGGCCGCGAAATCTA
CGGCTACAAGGTGCTCGGCTCGCTCGACGACGTCGCGCACTGGACCGAGGCACTGAAGATCGAATACGCGATCGTGGCGA
TTCCGTCCGCGTCGGTCGAGGTGCAGCGCCGGACGGCGACCCTCTGCGTGCGCGCCGGCTTGAAAGTGATGGTGCTGCCG
TCGCTGACCGCACTGATGCCGGGGCAGGGCTTCCTGTCCCAGATCCGTGAGATCGACCTCGAGGATCTGCTCGGCCGCGA
CGCCGTGACGATCGACACGCCGCACGTCGAGGCGCTGCTTCGCGGTCGTGTCGTGATGGTGACGGGCGCTGGCGGCTCGA
TCGGTTCCGAGCTATGCCGGCAGATCCTGCGTTTTGCGCCAGCGCAACTCGTCGCGTTCGACCTGTCCGAGTACGCGATG
TACCGCCTGACCGAGGAACTGCGCGAGCGCTTCCCCGATCAGCCGGTCGTGCCGATCATCGGCGACGCGAAGGATTCTCT
GCTGCTCGATCAGGTGATGTCCCGCCACGTGCCGCATATCGTGTTTCATGCGGCGGCATACAAGCACGTGCCGCTGATGG
AGGAGCACAACGCATGGCAGGCGCTGCGCAACAACGTGCTCGGCACGTATCGCGTGGCCCGTGCGGCGATCCGCCACGAC
GTGCGTCACTTCGTGCTGATCTCGACCGACAAGGCGGTCAATCCGACCAACGTGATGGGCGCGAGCAAGCGCCTCGCGGA
AATGGCCTGCCAGGCGTTGCAGCAGACGAGCGGGCGCACTCAATTCGAAACCGTGCGTTTCGGCAACGTGCTGGGCAGCG
CGGGCAGCGTGATTCCGAAGTTCCAGCAGCAGATCGCGAAGGGCGGCCCGGTGACGGTCACGCATCCGCAGATCACGCGC
TTCTTCATGACGATCCCGGAGGCGTCGCAACTCGTGCTGCAGGCGTCGAGCATGGGGCACGGCGGAGAGATCTTCATTCT
CGACATGGGCGAGCCGGTGAAGATCGTCGATCTCGCATGCGACCTGATCCGCCTGTACGGTTTCTCGGAAGATCAGATCC
AGATCGAGTTCACCGGGCTGCGGCCCGGCGAGAAGCTCTACGAGGAGCTGCTCGCGGACGACGAGACAACGACGCGCACC
CCGCATCCGAAACTGCGGATCGCGCGTGCGCGGGAAGTACCGGACAATTTCCTCGACGAGCTGCTGCCGTGGCTGATGCA
GCATCGTGTCCTGCCCGATGACGAAGTGCGGCGAGACCTGCGGCGCTGGGTGCCGGAATACCAAACGGCCGTGCCCCCGA
CGCTGCAGAGCGTGCCATCGGTGCGCGTCGTATCGAACGGGTAA

Protein sequence : 
MLRSKASWLSLSAFLFDLLAVVVAWLFAYLVRFNGSVPPDFLRGSLTALAWVLPVYALTFHLFGLYRGLWVFASLPDLVR
ISKALAGGGVIVMIGAVMFQPSPIIPRSVLLVSPLMLFLMMGGARALYRAMKEFYLYGGLVGQGKPVLVIGAGTAGANLA
RELSRSGEWRLVGLLDDDQTKQGREIYGYKVLGSLDDVAHWTEALKIEYAIVAIPSASVEVQRRTATLCVRAGLKVMVLP
SLTALMPGQGFLSQIREIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSIGSELCRQILRFAPAQLVAFDLSEYAM
YRLTEELRERFPDQPVVPIIGDAKDSLLLDQVMSRHVPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHD
VRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSGRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTHPQITR
FFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLACDLIRLYGFSEDQIQIEFTGLRPGEKLYEELLADDETTTRT
PHPKLRIARAREVPDNFLDELLPWLMQHRVLPDDEVRRDLRRWVPEYQTAVPPTLQSVPSVRVVSNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 6e-91 43
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-91 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep18194_A3984 YP_368227.1 polysaccharide biosynthesis protein CapD VFG1300 Protein 5e-92 46
Bcep18194_A3984 YP_368227.1 polysaccharide biosynthesis protein CapD VFG0029 Protein 1e-82 45