Gene Information

Name : Bcep18194_A3850 (Bcep18194_A3850)
Accession : YP_368093.1
Strain :
Genome accession: NC_007510
Putative virulence/resistance : Resistance
Product : major facilitator transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 757039 - 758232 bp
Length : 1194 bp
Strand : -
Note : -

DNA sequence : 
TTGAATCCGTCCCTGATTGCCATCCTGGCCACGGTCCTGCTCGACGCGATCGGCGTCGGGATCGTGATGCCGATCCTGCC
GGGGCTGCTGCACTCGCTCGCCAGCGCAGGCAGCACCGACACCCATTACGGGATCCTGCTCGCGCTGTACGCGTTCGCGC
AGTTCCTGTGCGCGCCGCTGCTCGGCGCGCTGAGCGACCGCTTCGGCCGCAGGCCCGTCCTGCTCGTGTCGCTGGCGGGC
GCCGCGCTCGACTACCTGCTGATGGCGCTCGCGCCGACACTCGCGTGGCTTTACGTGGGGCGGCTGATCGCGGGCATCAC
CGGCGCGAACGTCGCGGTCGCGACGGCCTATGTCACCGACGTCACCGCCGAGCCCGATCGCGCACGACGCTTCGGCCAGC
TCGGCGCGATGATGGGTATCGGCTTCATCGCGGGCCCGTTGATCGGCGGCCTGCTCGGCGCGCTGCATGTGCGCGCGCCG
TTCGTCGCGGCCGCCGTGCTCAACGCGCTCAACCTTGCGCTCGTCTGGCGCGCGCTGCCGGAATCGCGGCCGCGTTCGGC
CCGCGAAGGCCATGCGGTCGGCGCGCTCAACCCGTTCGCCAGCCTGCGCCGGCTGAGCGGCGCACCGGCGCTCGCGCCGC
TGATCGGCATTTACGTGATCGTGGCGCTGGTGTCGCAGGCACCCGCGACGCTGTGGATCCTGTACGGCCAGGAGCATTTC
GGCTGGTCGACGCCGATCGCGGGGCTGTCGCTGGCAGGCTACGGCGCGTGCCACGCACTCGCGCAGGCATTCGCGATCGG
TCCGCTGATCGCCCGGCTCGGCGAGCGTCGCGCACTCGCACTGGGCCTCGCGGGCGACGCGCTCGGGCTCGCGGCGATTG
CATTCGCGACCGCCGCGTGGGTGCCGTTCGCGCTGCTGCCGCTGTTCGCGGCGGGCGGGATGACGCTGCCGGCCCTGCAG
GCGATGCTCGCGCGACAGGTCGACGATGCGCGCCAGGGCGAACTGCAAGGCGCACTCGCGAGCGTGGCGAGCCTGATCGG
CGTCGCGGGGCCGCTGGTCGTCACCGCGACCTATGCGGCGACACGCGCGACGTGGCCGGGGCTCGTCTGGGCCGCGGCCG
CGCTGCTTTATCTGCTCGTCCCGCCGTTGCTGGCCGGTGCGCGGCCAGCGGGCGCGACACGGCCGTCTGCATGA

Protein sequence : 
MNPSLIAILATVLLDAIGVGIVMPILPGLLHSLASAGSTDTHYGILLALYAFAQFLCAPLLGALSDRFGRRPVLLVSLAG
AALDYLLMALAPTLAWLYVGRLIAGITGANVAVATAYVTDVTAEPDRARRFGQLGAMMGIGFIAGPLIGGLLGALHVRAP
FVAAAVLNALNLALVWRALPESRPRSAREGHAVGALNPFASLRRLSGAPALAPLIGIYVIVALVSQAPATLWILYGQEHF
GWSTPIAGLSLAGYGACHALAQAFAIGPLIARLGERRALALGLAGDALGLAAIAFATAAWVPFALLPLFAAGGMTLPALQ
AMLARQVDDARQGELQGALASVASLIGVAGPLVVTATYAATRATWPGLVWAAAALLYLLVPPLLAGARPAGATRPSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA CAJ77034.1 Tetracycline resistance protein Not tested AbaR1 Protein 2e-49 51
tet(G) AAK02051.1 tetracycline resistance protein Not tested SGI1 Protein 1e-47 51
tetA(G) ABZ01843.1 TetA(G) Not tested SGI2 Protein 1e-47 51
tetA(G) AGK06974.1 TetA(G) Not tested SGI1 Protein 1e-47 51
tetA(G) AGK07104.1 TetA(G) Not tested SGI1 Protein 1e-47 51
tet(H) YP_005176248.1 tetracycline efflux protein, class H Not tested ICEPmu1 Protein 1e-35 44
tetB AEA34667.1 tetracycline resistance determinant Not tested Not named Protein 4e-42 43
tetA(B) AEZ06045.1 tetracycline efflux protein Not tested Tn6167 Protein 5e-42 43
tetA(B) AAL08445.1 tetracycline resistance protein TetA(B) Not tested SRL Protein 4e-42 43
BJAB07104_00277 YP_008207742.1 Permeases of the major facilitator superfamily Not tested AbaR25 Protein 8e-42 43
BJAB0868_00281 YP_008211607.1 Permeases of the major facilitator superfamily Not tested AbaR26 Protein 8e-42 43
tetA(B) AEQ20905.1 tetracycline resistance protein Not tested Tn6166 Protein 8e-42 43
tetA YP_005797160.1 tetracycline resistance protein, class G (TETA(G)) Not tested AbaR4e Protein 4e-41 43
ABZJ_00260 YP_005524216.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) Not tested AbaR22 Protein 7e-42 43
tetA(B) AFH57202.1 tetracycline resistance protein Not tested AbaR4a Protein 5e-42 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep18194_A3850 YP_368093.1 major facilitator transporter AY264780.2.gene3.p01 Protein 2e-79 69
Bcep18194_A3850 YP_368093.1 major facilitator transporter AY743590.gene.p01 Protein 5e-66 58
Bcep18194_A3850 YP_368093.1 major facilitator transporter Y19114.gene.p01 Protein 7e-60 55
Bcep18194_A3850 YP_368093.1 major facilitator transporter NC_010410.6002612.p0 Protein 1e-49 51
Bcep18194_A3850 YP_368093.1 major facilitator transporter AF133140.gene.p01 Protein 1e-49 51
Bcep18194_A3850 YP_368093.1 major facilitator transporter AF133139.gene.p01 Protein 3e-50 51
Bcep18194_A3850 YP_368093.1 major facilitator transporter AF090987.gene.p01 Protein 8e-47 50
Bcep18194_A3850 YP_368093.1 major facilitator transporter AF070999.gene.p01 Protein 1e-43 46
Bcep18194_A3850 YP_368093.1 major facilitator transporter L06940.gene.p01 Protein 1e-40 46
Bcep18194_A3850 YP_368093.1 major facilitator transporter Y19116.gene.p01 Protein 2e-39 46
Bcep18194_A3850 YP_368093.1 major facilitator transporter AF038993.gene.p01 Protein 5e-37 45
Bcep18194_A3850 YP_368093.1 major facilitator transporter CP004022.1.gene2534. Protein 2e-36 45
Bcep18194_A3850 YP_368093.1 major facilitator transporter NC_011595.7059241.p0 Protein 1e-36 44
Bcep18194_A3850 YP_368093.1 major facilitator transporter NC_011586.7043399.p0 Protein 1e-36 44
Bcep18194_A3850 YP_368093.1 major facilitator transporter L06798.gene.p01 Protein 2e-38 44
Bcep18194_A3850 YP_368093.1 major facilitator transporter NC_010410.6003291.p0 Protein 1e-36 44
Bcep18194_A3850 YP_368093.1 major facilitator transporter AF121000.gene.p01 Protein 6e-39 44
Bcep18194_A3850 YP_368093.1 major facilitator transporter Y15510.gene.p01 Protein 2e-36 44
Bcep18194_A3850 YP_368093.1 major facilitator transporter AJ420072.gene.p01 Protein 2e-36 44
Bcep18194_A3850 YP_368093.1 major facilitator transporter NC_009085.4918440.p0 Protein 2e-33 43
Bcep18194_A3850 YP_368093.1 major facilitator transporter V00611.gene.p01 Protein 3e-42 43
Bcep18194_A3850 YP_368093.1 major facilitator transporter NC_010558.1.6275971. Protein 2e-42 43
Bcep18194_A3850 YP_368093.1 major facilitator transporter AB084246.gene.p01 Protein 2e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep18194_A3850 YP_368093.1 major facilitator transporter VFG1036 Protein 2e-42 43