Gene Information

Name : ldcA (Bcep18194_A5282)
Accession : YP_369520.1
Strain :
Genome accession: NC_007510
Putative virulence/resistance : Unknown
Product : L,D-carboxypeptidase A
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1619
EC number : 3.4.17.13
Position : 2337348 - 2338286 bp
Length : 939 bp
Strand : -
Note : catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine

DNA sequence :
ATGTCCTTCCAGCCCGCTGCGTCCTACACCATCCGCCTGCTTGCGCCGTCCGGCTATCCGCACGACCCGGACGCAATCAA
TCGCGCGCTCGAACGCCTCAGCACCGCACAGCACCGCATCGAGAACATCGAAGCGACGCAGCGGCGCTTCCAGCGGTTCG
GCGGCACCGACGGCGAGCGGGCAGGCGACCTGAACCGCCTTGCCGATCCCGAGCGGCCGCTGCCGGACATCGCGCTCGCG
GTGCGCGGCGGCTACGGCGCCGCGCGCATCCTGCACGGGCTCGACTATCGCGGGCTCGAGCGCAGGCTCCGCGACCAGCC
GGTCGCGCTCGTCGGCCACAGCGACTTCACGGCGCTCCAGCTCGCGCTGTACGCGAAGGCGCGCATCAAGACGTTCGGCG
GCCCGATGCTGTCCGCCGACTTCGGCGCGGAAACGCCGAGCGATTTCACGATGCAGCACTTCTGGCAGACGCTGACGCAG
CCGAGCACGACGATCATCGCCGAAGCGCCGCAAGTGCAGAGCGTGAACGTGACGGGCACGCTGTGGGGCGGCAACCTGGC
GATCCTCACGTCGCTGGTCGGCACGCCGTACATGCCCGACATCGAAGGCGGCATCCTGTTCATCGAGGACGTGAACGAGC
AGCCGTTCCGGATCGAACGGATGATCTACCAACTGCACCTGTCGGGGCTGCTCGCGCGCCAGCAGGCGCTCGTGCTCGGC
CAGTTCACCGGCGCGCGGCCGTTCGAGTACGACAACGGCTACGACATGCAGGCGATGATCGACCAGGTGCGTGAGGTGGT
CGGCATCCCGGTCGTGACGGGGCTCCAGTTCGGCCACGTGCCCGATCTGCTGACGCTGCCGTTCGGCGCGCAGGCGCAAC
TGGTCGCGAACGCGCATGGTTTCCGCCTCACTTTGTCGGACTATCCGCACCTCGGATGA

Protein sequence :
MSFQPAASYTIRLLAPSGYPHDPDAINRALERLSTAQHRIENIEATQRRFQRFGGTDGERAGDLNRLADPERPLPDIALA
VRGGYGAARILHGLDYRGLERRLRDQPVALVGHSDFTALQLALYAKARIKTFGGPMLSADFGAETPSDFTMQHFWQTLTQ
PSTTIIAEAPQVQSVNVTGTLWGGNLAILTSLVGTPYMPDIEGGILFIEDVNEQPFRIERMIYQLHLSGLLARQQALVLG
QFTGARPFEYDNGYDMQAMIDQVREVVGIPVVTGLQFGHVPDLLTLPFGAQAQLVANAHGFRLTLSDYPHLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 2e-66 47