Gene Information

Name : Bcep18194_C6998 (Bcep18194_C6998)
Accession : YP_366688.1
Strain :
Genome accession: NC_007509
Putative virulence/resistance : Virulence
Product : ClpA/B protease, ATPase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 556964 - 559813 bp
Length : 2850 bp
Strand : -
Note : -

DNA sequence :
ATGCCCGCACTTTGCGATATCTGCCACGCCCGGCCGGCCGTCGCGCGCGCAACCGTGATGCAGGACGGCGAGCGCAAGAC
GATCTCGATCTGCGATTACCACTTCCGTCAGCTGATGCGGCATCAAAGCATGCTGAACCCGTTCGATTCGCTGCTCGGCG
GTGGCGGCTCGTCGTCGCTGTTCGGTGGGCTCGACGACGACGCGCCGCTCGCCGCCGAGATCCCGCGCGAATCGGTCGAC
CCGACCGATGCGTTCAGCGAGCAGACGCTGGAACTGCTGCAGCGCGCGGCCGAAAAGGCGCACGAACTGCGCCGCAGCGA
GCTCGATTCCGAACACCTGCTGTACGCGCTCGCGGACACCGACGTGTGCGCCGCGCTGCTGAAGGAACTGAAGCTGTCGC
CGCAGGACATCCGGTCGTACATCGACGAGCATGCGCACACCGGCACGGCCGACGCCGATGCGCCGCTCGACAAGCTGTCG
ATCTCGCCACGCGTGAAGAAAGCCGTGCAGTACGCGTTCCAGGCGTCGCGCGATCTCGGTCACTCGTACATCGGCCCCGA
GCACCTGCTGATCGGGCTCGCCTCGGTGCCGGACAGCGTCGCCGGCACGCTGCTGAAGAAATACGGCGTCACGCCCGAGG
CGTTGCGCCAGAAAGTCGTGAAGGTGGTCGGCAAAGGCGCCGAGGACGGCCGCGTCGATGCGCCGACCGGCACGCCGAAC
CTCGACAAGTTCGGCCGCGACCTCACCGCGATCGCGCGCCAGGGCAAACTCGACCCGGTGCTCGGCCGCGCGCAGGAAAT
CGAGAGCACGATCGAAGTGCTCGCGCGTCGCAAGAAGAACAACCCGGTGCTGATCGGCGAGCCGGGCGTCGGCAAGACGG
CGATCGTCGAAGGGCTCGCGCAGCGGATCGTCAACGGCGACGTGCCCGAAGTGCTGCGCGACAAGCGGCTCGTCGAAGTC
AACATCAACTCGATGGTGGCCGGCGCGAAGTATCGCGGCGAATTCGAGGAGCGCGCGAAGCAGCTGATCGACGAAGTCAC
TGCGAAGCAGGACGAACTGATCCTGTTCATCGACGAGCTGCATACGATCGTCGGTGCCGGCCAGGGCGGCGGCGAAGGCG
GCCTCGACATCGCGAACGTGCTGAAGCCCGCGCTTGCGCGCGGCGAGCTGAGCCTGATCGGCGCGACGACGCTCAACGAA
TACCAGAAGTACATCGAGAAGGACGCCGCGCTGGAACGGCGCTTCCAGCCGGTGTTCGTGCCGGAGCCGAGCGTCGAGCA
GACGATCGTGATCCTGCGCGGGCTGCGCGACAGCCTCGAGGCGCACCACCAGGTGACGTTCGCCGACGACGCATTCGTCG
CGGCCGCGGAATTCGCCGATCGCTACATCACGTCGCGCTTCCTCCCCGACAAGGCGATCGACCTGATCGACCAGGCTGCC
GCGCGTGTGCGGATCGGCGCGACGTCGCGCCCGGTCGACATCCAGGAAGGCGAAGCGCAGATCGCGCAACTGAAGCGCGA
GCAGGACTACGCGACGTCGCGCAAGCGCTTCGACGAAGCGAAGCAGTTCGAGGAGCAGATCAACGCGAAGCAGAAATCCG
TCGACGAGATGATGGAGGCGTGGCAGCGCAAGACGGGCTCCGAAACGCTCGAAGTGACCGTCGAATCGGTGGCCGAGGTC
GTGTCGCGGCTGACCGGCATCCCCGTGTCCGAGCTCACGCAGGAAGAACGCCAGAAGCTGCTGAAGATGGAAGAGCAGCT
GCGCGAGCGCGTGGTCGGCCAGAGCGATGCCGTGGTGGCGGTCAGCGATGCCGTGCGGCTGTCGCGCGCGGGGCTCGGCC
AGACGCACCGGCCGATCGCGACGTTCCTGTTCCTCGGGCCGACGGGCGTCGGCAAGACCGAGCTCGCGAAGGCGCTGGCC
GAGACCGTGTTCGGCGACGAGCAGGCGATCATCCGCATCGACATGTCCGAGTACATGGAGCGGCACGCGGTCGCGCGGCT
GATCGGCGCGCCGCCCGGGTACGTCGGTTACGACGAGGGCGGCCAGCTCACCGAGCGCGTGCGGCGCCGCCCGTACAGCG
TGATCCTGCTCGACGAGATCGAGAAGGCGCACCCGGACGTCTACAACGTGCTGCTGCAGGTGTTCGACGACGGCCGCCTG
ACCGACGGCAAGGGCCGCGTGGTCGACTTCAGCAACACGATCATCATCGCGACGAGCAACCTCGGCGCCGCGATCATCAT
GGACAACCTCACGCAACCGGAAGCCGCGCGCAAGACCGACAAGGCGATCCGCGAGGAACTGATGCAGGTGCTGAAGGGCC
ATTTCCGCCCCGAGTTCCTGAACCGGATCGACGAGGTGATCGTCTTCCATGCGCTGTCGAAGGAGAACATCCGCTCGATC
GTGCAGATCCAGCTCGACCGCGTGGTGCGCACGGCCGCCGCGCAGGACATCACGCTCGTGATGGGCGACTCGCTCGTCGA
GCACCTGACCGAAGCCGGCTACCAGCCGGAGTTCGGCGCGCGCGAGCTGAAGCGCCAGATCCGCCAGACCATCGAGACGC
GGCTCGCGAAAGAAATCCTCGCCGACCGGCTGAAGTCGGGCGACCGGTGCGAAGTCGACTACGACAAGGCCAGCGACGAA
GTGAAGTTCAACACGTTCGCCGCCCCTGAAGCGAAGGAGACCAAGGACGCGAAGAAGGATGCCGACGGCAAGGCGAAACC
GAACGGCAAGGCGGCCAAGGCAGGCAACGACGCGAAGACGGGCGACACGCCCGCCGATGCACCGCCGCCCGCGCCTGCCG
CGAAAGCGTCCGGCAAGAAGTCGTCCGGCACGAAGAAGGACGCGCACTGA

Protein sequence :
MPALCDICHARPAVARATVMQDGERKTISICDYHFRQLMRHQSMLNPFDSLLGGGGSSSLFGGLDDDAPLAAEIPRESVD
PTDAFSEQTLELLQRAAEKAHELRRSELDSEHLLYALADTDVCAALLKELKLSPQDIRSYIDEHAHTGTADADAPLDKLS
ISPRVKKAVQYAFQASRDLGHSYIGPEHLLIGLASVPDSVAGTLLKKYGVTPEALRQKVVKVVGKGAEDGRVDAPTGTPN
LDKFGRDLTAIARQGKLDPVLGRAQEIESTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEVLRDKRLVEV
NINSMVAGAKYRGEFEERAKQLIDEVTAKQDELILFIDELHTIVGAGQGGGEGGLDIANVLKPALARGELSLIGATTLNE
YQKYIEKDAALERRFQPVFVPEPSVEQTIVILRGLRDSLEAHHQVTFADDAFVAAAEFADRYITSRFLPDKAIDLIDQAA
ARVRIGATSRPVDIQEGEAQIAQLKREQDYATSRKRFDEAKQFEEQINAKQKSVDEMMEAWQRKTGSETLEVTVESVAEV
VSRLTGIPVSELTQEERQKLLKMEEQLRERVVGQSDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTELAKALA
ETVFGDEQAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHPDVYNVLLQVFDDGRL
TDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQPEAARKTDKAIREELMQVLKGHFRPEFLNRIDEVIVFHALSKENIRSI
VQIQLDRVVRTAAAQDITLVMGDSLVEHLTEAGYQPEFGARELKRQIRQTIETRLAKEILADRLKSGDRCEVDYDKASDE
VKFNTFAAPEAKETKDAKKDADGKAKPNGKAAKAGNDAKTGDTPADAPPPAPAAKASGKKSSGTKKDAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-154 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep18194_C6998 YP_366688.1 ClpA/B protease, ATPase subunit VFG0079 Protein 9e-176 50