|
Name : xcsE (XCV0757) Accession : YP_362488.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Virulence Product : type II secretory pathway ATPase Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 865602 - 867089 bp Length : 1488 bp Strand : + Note : - DNA sequence : ATGAGCAGCGCCCGCGCCAGCATTTCCTATGCATTCGCCAAGCGTCACGGCGTAGTGCTGCTTGGCAGCGACACCACCGC GCAGATCGGTTTGCGCGAAGGTGGCGATGTGCAGGCCCTGATCGAGTTGCGCCGCGCGTTGGGCATGCCACTGCAGGTGC GCACGCTGGCGCCGTCGGTGTTCGACCGGCATGTATCGGAGATCTACGCCGATGCCGGGCTGGAGCAAGGTGTGCAGGTG GAAGCGCTGGATCTGCATGGCAGCCTGGATTCGTTGATCGACGACATTCCCACCGCCGATCTGCTCGACAGCCAGGACGA TGCGCCGATCATTCGTTTGATCAACGGCATCATCGCCGAGGCCGCGCGGCTGGGTGCATCCGACGTGCATCTGGAATCCT ACGAGTCGCGCCTGCGCGTGCGCCTGCGCGTGGATGGCGTGATGCGCGAGGCAGCCACGCTGCCCGGACGCATCGCACCG CTGCTGGTGTCGCGCGTCAAGGTGATGGCGCGGCTGGATATCGCCGAAAAACGCATCCCACAGGATGGGCGCGTGTCGCT GGTGATGGGGGCCAAGGCACTGGACGTGCGTGTGTCCACGTTGCCCACGCGCGGCAGCGAGCGTGTGGTGTTGCGTATCC TGGATAAGGAGCAGGGCACGCTGTCGCTGGCGCAGCTGGGCATGCCACCTGCGGTGATGCACACCGTGCAGCGCGCATTG CAGGTGCCCAATGGCATCGTGCTGGTCACCGGGCCCACCGGTTCGGGCAAGACCACGACCTTGTACGCGGCGCTGCGCCT GCTCAACGATGGCTCGCGCAACATCCTCACCGTGGAAGATCCGGTGGAATACGCCATCGATGGCGTCGGCCAGACCCAGG TCAACGCACGTGTCGGCATGACCTTCGCCGCCGGCCTGCGCGCGATCCTGCGCCAGGACCCGGACGTGGTGATGATCGGC GAGATCCGCGATACCGAGACCGCGCAGATTGCGGTACAGGCCAGCCTCACCGGCCATCTAGTGCTCTCCACCGTGCACAC CAACGATGCGGTGGGCGCGGTCACGCGGTTGCGCGATATGGGGATCGAGCCGTTCTTGCTGGCTTCCAGTCTGCGACTGA TCCTGGCGCAGCGGCTGGTGCGGCGCTTGTGCCCGCAATGCCGTAGCGAGCGTTCGATCGATACCGGCACGCGTCAACTG CTGGATGCGCCGGCCGATGCAGTGATCTACACCGCCGTGGGCTGCAACGCTTGCCACCACAGCGGCTACGCCGGCCGCGT GGGCATCTACGAAGCGATTGCGGTAGACGATGCGATGCGCCGTTTGATCGGCGACAACGCCGACGAAGACGCGCTGGCTG CAGTCGCCTTCGCACGCGCGCCGCGGCTGGGCGATGCCGCACGCGCTGCCGTGCTGCAAGGCCTGACTACGCTGGAAGAA GCGCTGCGTGTGACCCGCCAACAGGACGACGCGCATGCCGCAATTTGA Protein sequence : MSSARASISYAFAKRHGVVLLGSDTTAQIGLREGGDVQALIELRRALGMPLQVRTLAPSVFDRHVSEIYADAGLEQGVQV EALDLHGSLDSLIDDIPTADLLDSQDDAPIIRLINGIIAEAARLGASDVHLESYESRLRVRLRVDGVMREAATLPGRIAP LLVSRVKVMARLDIAEKRIPQDGRVSLVMGAKALDVRVSTLPTRGSERVVLRILDKEQGTLSLAQLGMPPAVMHTVQRAL QVPNGIVLVTGPTGSGKTTTLYAALRLLNDGSRNILTVEDPVEYAIDGVGQTQVNARVGMTFAAGLRAILRQDPDVVMIG EIRDTETAQIAVQASLTGHLVLSTVHTNDAVGAVTRLRDMGIEPFLLASSLRLILAQRLVRRLCPQCRSERSIDTGTRQL LDAPADAVIYTAVGCNACHHSGYAGRVGIYEAIAVDDAMRRLIGDNADEDALAAVAFARAPRLGDAARAAVLQGLTTLEE ALRVTRQQDDAHAAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-113 | 51 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-112 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcsE | YP_362488.1 | type II secretory pathway ATPase | VFG0182 | Protein | 2e-118 | 55 |
| xcsE | YP_362488.1 | type II secretory pathway ATPase | VFG1876 | Protein | 3e-114 | 51 |
| xcsE | YP_362488.1 | type II secretory pathway ATPase | VFG2048 | Protein | 3e-113 | 51 |
