Name : xylA (XCV4330) Accession : YP_366061.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 4977436 - 4978773 bp Length : 1338 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGAGCAACACCGTGTACATCGGCGCGAAAGAATATTTCCCCGGCATCGGCAAGATCGGTTTCGAAGGCCGCGATTCGGA CAACCCGCTCGCGTTCAAGGTCTACGACGCCAACAAAACCATCGGCGACAAGACCATGGCCGAGCATCTGCGCTTTGCCG TGGCCTACTGGCACAGCTTCTGCGGCAATGGCGCCGACCCGTTCGGCCCGGGCACGCGGGCGTATCCGTGGGATGCGGGC ACTACCGCGTTGAACCGTGCCGAAGCCAAGGCCGATGCGGCGTTCGAGTTCTTCACCAAGCTCGGCGTGCCGTACTACTG CTTCCACGATATCGACCTGGCACCGGATGCCGACGACATCGGCGAGTACGAAAAGAATCTCAAACACATGGTGGGCATCG CCAAGCAGCGCCAGGCCGACACCGGCATCAAGCTGTTGTGGGGCACGGCCAACCTGTTCTCGCATCCGCGCTACATGAAT GGCGCATCGACCAACCCGGACTTCAATGTCGTGGCGCGTGCGGCGGTGCAGGTCAAGGCCGCGATCGATGCCACCGTTGA ATTGGGCGGCGAAAACTACGTGTTCTGGGGCGGTCGCGAAGGCTATGCCTGCCTGCACAACACGCAGATGAAGCGCGAGC AGGACAACATGGCGCGCTTCCTCACCCTGGCGCGCGACTACGGCCGCGCGATTGGCTTCAAGGGCAATTTCCTGATCGAG CCCAAGCCGATGGAGCCGATGAAGCACCAGTACGATTTCGATAGCGCCACGGTGATCGGCTTCCTGCGCCAGCATGGCCT GGATCAGGACTTCAAGCTCAATATCGAAGCCAATCACGCCACGCTGTCGGGCCACAGCTTCGAGCATGACCTGCAGGTGG CATCCGATGCCGGCCTGCTCGGCAGCATCGATGCCAACCGCGGCAACCCGCAGAACGGCTGGGACACCGACCAGTTCCCG ACCGACCTGTACGACACCGTCGGCGCGATGCTGGTGGTGCTGCGGCAGGGTGGCCTGGCACCGGGCGGCCTGAACTTCGA TGCCAAGGTGCGTCGCGAATCGTCCGACCCGCAGGACCTGTTCCTGGCCCATATCGGCGGCATGGACGCGTTCGCACGCG GGCTGGAAGTGGCCAACGCGCTGCTGACCGCCTCGCCGCTGGAACAGTGGCGCGCCGAGCGTTACGCCAGCTTCGACAGC GGCGCCGGCGCGGATTTTGCCGCAGGCAAGACCACGCTGGCCGATCTGGCCAAGCACGCGGCCAGCAATGCGCCCCAGCA ACTCAGCGGCCGCCAGGAAGCGTATGAAAACCTGATCAATCAGTATCTGACGCGTTGA Protein sequence : MSNTVYIGAKEYFPGIGKIGFEGRDSDNPLAFKVYDANKTIGDKTMAEHLRFAVAYWHSFCGNGADPFGPGTRAYPWDAG TTALNRAEAKADAAFEFFTKLGVPYYCFHDIDLAPDADDIGEYEKNLKHMVGIAKQRQADTGIKLLWGTANLFSHPRYMN GASTNPDFNVVARAAVQVKAAIDATVELGGENYVFWGGREGYACLHNTQMKREQDNMARFLTLARDYGRAIGFKGNFLIE PKPMEPMKHQYDFDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFP TDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTASPLEQWRAERYASFDS GAGADFAAGKTTLADLAKHAASNAPQQLSGRQEAYENLINQYLTR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 6e-96 | 52 |
ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-96 | 52 |