Gene Information

Name : XCV4238 (XCV4238)
Accession : YP_365969.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 4867158 - 4869068 bp
Length : 1911 bp
Strand : -
Note : -

DNA sequence :
ATGTCGTCGAAGGGCACGGTTGACGCCATGGACCCGCGCCTGCTGCCGTACTACACCCGCGAATTGCAGCACGTGCGCGA
CATGGGCGCGGAGTTCGCGCGCGAGTATCCCAAGATCGCCGGACGGCTCGGTCTGGACGCGTTCGAATGTGCCGACCCGT
ATGTCGAGCGGTTGCTGGAAGGCTTCGCGTTCCTGGCCGCGCGCGTGCAACTCAAGCTGGACGCGCAGTACCCCGTGTTC
ACCCAGCACCTGCTGGAGATGGTCTACCCGCATTATCTGGCGCCGCTGCCGTCGATGGCGGTGGTGCAGTTGCAGCCGGA
TCTGAAAGACAGCGGGCTGGCAGCAGGCGTGGTGGTGCCGCGGCAAAGTGCGCTGCGCAGCCTGGTCGGCCCGGGCGAGC
GCACCGCCTGCGAATTTCGCACCGCGCATGCAGTGAGCTTGTGGCCGTTGCAGCTGGCCGAGGTCAAGTATCTTGAATCG
CCGGCCGCGTTGGCGGCTGCCGGCATCGCCTTGCCGGCCGGGCGCGTGGTGCGTGCCGGCGTGCGTCTGCGCTTTGAGCT
GGTGGGTGGTGCGCAGACGCAAGCGCTGGCGCTGGATCGGCTGCCGCTATTCCTGGCCGGCGCCGACGGCTTGCCCAAGC
GGTTGTACGAACAGCTGCATGCCGATACCACCGCCGTGGTGGTGCGTGGCAGTAATGCCAGCGGTGGCATGCTGGAGATG
ACGCTGGGCGCCGATACCGTGCAGATGCGCGGCTTTGCCGGCGACGATGCATTGATTCCGTACGACGGCCGTTCGTTCAG
TGGTTACCGCCTGCTGCAGGAATACTTCGCCTGTCCGGAGCGCTTTCTGTTCGCAGAACTCACCGGGCTGCGCGCGTCAT
TGCGGCGGTTGCACGGCAGCAGCTTCGAGGTGGTGGTGTTGCTGCAACGCAGCCTGCCCAGCCTGGCTGCGGCAGTGGGC
GCCGAGCATTTCAAATTGTTCTGCACCCCGGCAATCAATCTGTTCCCGCGGCGTGCCGATCGCATCCATCTGCACGCCGG
CCTGCACGAATACCACGTGCTGGCCGACCGCACCCGGCCGATGGATTTCGAGATCCATCATTTGGGCGAAGTGGAAGGCT
TCGGCGATCGTCAGGAGCCGGAGCAACGCTTCGCGCCGTTCTATGGTGGCGACGCACGCACTTGGCATGCCCGGCATGGC
GCGTTCTACAGCATGCGCCGCGAGCCGCGCATGCTATCGGCCCGCCAGCGCCGCGATGGCGCGCGGTCGAGTTATGTGGG
CAGCGAAGTGTTCGTCAGCCTGGTCGATGCCGACGATCAGCCGCACAGAACGCGCCTGCGCCAGCTTGGGCTGCAACTGT
GGTGCAGCAACCGCGATCTGCCGCTGCATATGCCGGTAGGCAAGGGCACCACCGATTTCACCATGGACAGCGGCGTGCCG
GTGCAGAGCGTGCGCTGCGTGGCCGGGCCGACCAAGCCGCGCCCGGCGTTGTCGGATGGGCAGACTGCGTGGCGCCTGCT
CAGCCAATTGCAGCTCAATTATCTCTCGCTCTTCGAAGACGGCCCCGACGGCGCCGCTGCGCTACGCGAGATCCTCACCT
TGTACTGCGACCCGTTCGACGCATCCGCGCAGCGGCAGATCGAAGGCGTCAAGCAGGTGAGCGGCACACCGATCGTGCGG
CGTATCCCGGTGCCTGGCCCGATCACCTTCGGCCGCGGCCTGGAGATCACGCTGACCTGCGAGGACGCCGCGTTCGAAGG
CACCGGCGCCTTCCTGCTGGCTTCGGTGCTGCGGCACTTCTTCGCGCGCTATGTCTCGGTGAATTCCTTCACCGAAACCG
TGCTGCGCACCACCGAACGCAACGAGGTGGCCCGATGGCTAGCCCAGCCCGGCACGCGCCCACGCCTGTGA

Protein sequence :
MSSKGTVDAMDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARVQLKLDAQYPVF
TQHLLEMVYPHYLAPLPSMAVVQLQPDLKDSGLAAGVVVPRQSALRSLVGPGERTACEFRTAHAVSLWPLQLAEVKYLES
PAALAAAGIALPAGRVVRAGVRLRFELVGGAQTQALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSNASGGMLEM
TLGADTVQMRGFAGDDALIPYDGRSFSGYRLLQEYFACPERFLFAELTGLRASLRRLHGSSFEVVVLLQRSLPSLAAAVG
AEHFKLFCTPAINLFPRRADRIHLHAGLHEYHVLADRTRPMDFEIHHLGEVEGFGDRQEPEQRFAPFYGGDARTWHARHG
AFYSMRREPRMLSARQRRDGARSSYVGSEVFVSLVDADDQPHRTRLRQLGLQLWCSNRDLPLHMPVGKGTTDFTMDSGVP
VQSVRCVAGPTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILTLYCDPFDASAQRQIEGVKQVSGTPIVR
RIPVPGPITFGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNSFTETVLRTTERNEVARWLAQPGTRPRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 2e-106 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCV4238 YP_365969.1 hypothetical protein VFG2074 Protein 6e-159 56