Gene Information

Name : hrpB1 (XCV0427)
Accession : YP_362158.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Virulence
Product : HrpB1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 477533 - 477988 bp
Length : 456 bp
Strand : +
Note : -

DNA sequence :
GTGGAGAAGACTCAATGTCCCGGGTCGGTCGTGAGTGGGCTCATCGAACTGATCACGGTCGGACTCACCCATGAAAAGAT
TCAGGACGCTGCCGCTGTGCTGGCCGCAGTCCGCGTCCTGCGGCCAGAGCTGAAAGCGCTGGACACCTTCGATGCATGGA
TTTCGATCAAGCGCGGCAATTACGTGGAAGGTGCGCGCCTGTTGCGCGAACTGGAGAGCGACGCCGGCTCCAAGCCGCTG
TGCAGGGCCTTGTACGCCTGCTGCCTGTTCGCGATGGGGGACCCGTCGTGGCATGGCGTTGCAGACGGGCTGATCGAAGA
AGACGCCGATGCCGATGCGGTGGCCCTGGTCAAGGCGCTGTCCGGGCGAAGCACCCCAACGTCCGCGCCGGCGGAAGTAC
CGGTCGAATCTTCAGCACCGATGGAAGTTCCGAATTCGCAGTACCTGCGCGCCTGA

Protein sequence :
MEKTQCPGSVVSGLIELITVGLTHEKIQDAAAVLAAVRVLRPELKALDTFDAWISIKRGNYVEGARLLRELESDAGSKPL
CRALYACCLFAMGDPSWHGVADGLIEEDADADAVALVKALSGRSTPTSAPAEVPVESSAPMEVPNSQYLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB1 YP_362158.1 HrpB1 protein Virulence Hrp PAI Protein 3e-52 100
hrpB1 AAB08456.1 HrpB1 Virulence Hrp PAI Protein 2e-52 100
hrpB1 YP_198725.1 protein HrpB1 Virulence Hrp PAI Protein 1e-51 97
hrpB1 AAP34344.1 HrpB1 Virulence Hrp PAI Protein 5e-51 97
hrpB1 BAB07857.1 HrpB1 Virulence Hrp PAI Protein 8e-52 97
hrpB1 AAF61286.1 HrpB1 Virulence Hrp PAI Protein 8e-52 97
hrpB1 NP_640762.1 HrpB1 protein Virulence Hrp PAI Protein 8e-51 97
XC_3011 YP_244079.1 HrpB1 protein Virulence Hrp PAI Protein 6e-43 85
hrpB1 NP_636605.1 HrpB1 protein Virulence Hrp PAI Protein 6e-43 85