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Name : hrcU (XCV0426) Accession : YP_362157.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 476245 - 477318 bp Length : 1074 bp Strand : - Note : - DNA sequence : ATGTCGGAAGAAAAAACCGAGAAGCCGACCGAGAAGAAACTGCGGGATGCGCGCAAGGACGGGGAAGTTCCGGTCAGCCC GGACGTCACTGCAGCGGCGGTGCTCTTCGGCGCGTTATTGGTGATGAAATCGGCCGGCGATTACTTCTCCGATCACATGC GCGCATTGATGACGATCGGCTTCGATTTTTCCGAACATACACGCGATGCAGCGGCCATCAACCGCGCACTCGGCCATATC GGCATCCAGGGATTGCTGTTGATGCTGCCGTTCCTGGCTGCCTGCCTGGTGGCCGGTATGGCGGGCGGTGCGTTCCAGAC TGGCCTGAATGCCTCGCTCAAGCCGGTGGCGCCCAAGTTCGATTCCCTCAATCCCGCAACCGGGGTCAAGAAACTCTTTT CGTTGCGAAGCCTCATCAACTTGCTGAAGTTGATCATCAAGGCCATCTTGATTGGCGTGGTGCTGTGGGTCGGTATCCGC GCCCTCATGCCGATGATCATTGGGCTTGCCTACGAGACACCGCTTGACGTTGCGCAAATTGCCTGGCGCACCCTGGGCAT GCTCTTCGCACTGGGCGTGCTGCTGTTCGTCCTGGTCGGCGCTGCAGACTGGAGCGTGCAGCGCTGGCTGTTCATCCGCG ACAAGCGAATGAGCAAGGACGAGCAGAAGCGCGAAGTCAAGGAAAGCGAGGGCGACCCCGAAATCAAGGACAAGCGCAAG GAATTCGCCAAGGAGCTGGTCTTCGGCGACCCGCGCGAGCGCGTGGCCAAGGCCAAGGTGATGGTGGTCAACCCGACCCA TTACGCAGTGGCGCTGGCCTACGAGCCCGACGACTTCGGCTTGCCGCAGGTCGTTGCCAAGGGCGTGGACGACGGCGCAC TGGAACTGCGCGCCTTCGCGCATAACCAGGGCATTCCGATCGTTGCCAATCCGCCACTGGCGCGTGCGCTGTATCAGGTT GAATTGGGCGATGCAATCCCCGAGCCACTGTTCGAAACGGTTGCGGTGGTGTTGCGCTGGGTCGATGAACTCGGTCGCGA CCACGGCGACGGCGATGGAGCCCTGCCATGCTAG Protein sequence : MSEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTRDAAAINRALGHI GIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIR ALMPMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRK EFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALYQV ELGDAIPEPLFETVAVVLRWVDELGRDHGDGDGALPC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-129 | 100 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 1e-124 | 95 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 4e-124 | 94 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 1e-121 | 94 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-122 | 94 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 4e-106 | 82 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 4e-106 | 82 |
