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Name : hrcV (XCV0425) Accession : YP_362156.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Virulence Product : HrcV protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 474314 - 476236 bp Length : 1923 bp Strand : - Note : - DNA sequence : GTGCGAGCGACAAGGTATTTCGCTTATAGCGGCGAAGTAGCCATCGCCGCCCTGGTAGTGGCGGTCATCGGGCTGATGAT CCTGCCGCTGCCAACGCCCATGATCGATACGTTGCTGGGCATCAACATCACCCTGAGCGTGGTGCTGTTGATGGTCACGA TGTATGTGCCCGACTCGATCTCGCTCTCGTCGTTTCCTTCCCTGCTGCTGTTCACCACGCTACTGCGGTTGTCATTGAAT ATCGCCTCGACGAAGTCGATCCTGCTGCATGCCGAGGCGGGCCATATCATCGAGAGCTTCGGCGAGCTGGTGGTCGGTGG CAATCTGGTGGTGGGCCTGGTGGTTTTCTTGATCATCACCACCGTGCAGTTCATCGTGATCGCAAAGGGTTCCGAACGCG TTGCCGAGGTCGGTGCGCGCTTCACGTTGGACGCAATGCCCGGCAAGCAGATGAGTATCGATGCCGACCTGCGTGGCGGC AACCTGACCGCAGATGAGGCACGCCGCAAACGCGCGCGGCTGGCCATGGAAAGCCAACTGCACGGCGGCATGGATGGCGC CATGAAATTCGTCAAGGGTGATGCGATCGCCGGCCTGGTGATTACCATGGTCAACATCCTGGCCGGTATCGTGGTCGGCG TGACCTACCACGGCATGACGGCCGGCGATGCCGCCAACCGCTTTGCGATCCTGTCGGTGGGCGATGCGATGGTGTCGCAG ATCGCCTCACTGCTGATATCGGTGGCCGCCGGCGTCATGATCACCCGCGTGGCCAACGAGAACGAGACCAGGCTCAGCTC GCTCGGGCTCGATATCGGCCGTCAGCTCACCAGCAATGCGCGGGCCCTGATGGCAGCGAGCGTGCTGCTGGCCTGCTTTG CGTTCGTCCCCGGCTTTCCCGCCGTGCTGTTCCTGCTGCTGGCAGCGGCCGTCGGCGCCGGTGGCTATACGATCTGGCGC AAGCAACGCGACATCAGCGGCACCGATCAGCGCAAGTTGCCTTCGGCGAGCCGTAAAGGTGCCAAAGGCGAGGCGCCACA TATTCGCAAAAACGCCCCGGATTTCGCCTCACCCTTATCGATGCGGCTGTCGCCGCAGCTGGCCGCTCTGCTCGACCCCG CGCGGCTGGATCAGGCGATCGAAAGCGAGCGGCGGCAATTGGTCGAATTGCTGGGCTTGCCGTTTCCCGGGATCGCGATA TGGCAGACCGAGTCGCTGCAAGGCATGCAATACGAAGTGTTGATTCATGATGTCCCCGAGACACGCGCCGAACTGGAGAA CACCGACGACATGCAGGCCGCACTGGCCCGGCAGGCCATCTCACCCCTGCATGCACGAGCGCACTTGTTCGTCGGCATCC AGGAGACGCAGTGGATGCTGGAGCAGGTGGCCGTGGACTACCCCGGGCTGGTTGCGGAGGTCAACAAGGCGATGCCCGCC CAGCGCATAGCCGATGTGTTGCGGCGCCTTCTGGAAGAAAGGATTCCGGTGCGCAATATCAAGAGCATTCTGGAAAGTCT GGTGGTCTGGGGGCCGAAGGAAAAGGATCTTCTGATGTTGACCGAGTATGTGCGCTGCGATCTGGGCCGTTATCTGGCGC ATACCGCAACCGCAGGCACCGGGCAGCTGCCCGCAGTGATGCTCGACCATGCTGTCGAACAACTGATCAGGCAATCGATT CGCGCGACCGCGGCCGGCAATTTCCTGGCACTTCCGCCCGAGCAGGCGAACCAGCTTGTCGAACAGGTGGAACGCATCGT CGGCGACCATGCGCAGCATCCGCTGGCGGTGGTCGCGTCGATGGACGTGCGCAGGTATGTGCGCCGCATGATCGAAGCAC GGCTGACCTGGCTGCAGGTCTATTCGTTCCAGGAGCTGGGTTCGGAGGTGCAGCTGCAGCCGATCGGTAGAGTGGTGGTG TGA Protein sequence : MRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLLRLSLN IASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGG NLTADEARRKRARLAMESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGDAMVSQ IASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGGYTIWR KQRDISGTDQRKLPSASRKGAKGEAPHIRKNAPDFASPLSMRLSPQLAALLDPARLDQAIESERRQLVELLGLPFPGIAI WQTESLQGMQYEVLIHDVPETRAELENTDDMQAALARQAISPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVNKAMPA QRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLGRYLAHTATAGTGQLPAVMLDHAVEQLIRQSI RATAAGNFLALPPEQANQLVEQVERIVGDHAQHPLAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| XC_3013 | YP_244081.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| hrcV | NP_636603.1 | protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-98 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hrcV | YP_362156.1 | HrcV protein | VFG0064 | Protein | 8e-104 | 45 |
| hrcV | YP_362156.1 | HrcV protein | VFG0384 | Protein | 7e-96 | 42 |
| hrcV | YP_362156.1 | HrcV protein | VFG0198 | Protein | 1e-91 | 42 |
