Gene Information

Name : XCV4089 (XCV4089)
Accession : YP_365820.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4685410 - 4686099 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGCTCTCGTCAGTTTGCGCAACATCACCAAGACCTACCAACGCGGCCCCGAGCAGGTGCAGGTGCTGCACGGCAT
CGATCTGGAGATCGCCAGCGGCGACTTCGTGGCATTGATGGGCCCCTCCGGATCGGGCAAGACTACCTTGCTCAATCTGA
TCGGCGGGCTGGACAACCCCAGCGGTGGCGAGATCGAGATCGAAGGCGAGCGCATCGACCGCATGAGCGGCGGCCAGCTG
GCGACCTGGCGCAGCCACCACGTCGGCTTCGTATTCCAGTTCTACAACCTGATGCCGATGCTCACCGCGCAAAAGAATGT
GGAGCTGCCATTGCTGCTCACCTCGCTCAATGCCGCCCAACGCAAGCGCAATGCCGAGATCGCATTGACCCTGGTCGGCC
TGCAGGAGCGTCGCAACCACAAGCCCAGCGAATTGTCCGGCGGCCAGCAGCAACGCGTGGCGATTGCGCGCGCAATTGTC
TCCGACCCTACTTTCCTGATCTGCGACGAGCCCACCGGCGATCTGGACCGCCACAACGCCGAAGAAATCCTGCGCCTGCT
GCAGGAACTCAATCGCGAACATGGCAAGACCATCGTGATGGTCACCCACGACCCCAAGGCTGCCGAATACGCCACCCACA
CCATCCATCTGGACAAGGGCGAGCTGGCCGATGCGCCGCTTGCACTGTAA

Protein sequence :
MSALVSLRNITKTYQRGPEQVQVLHGIDLEIASGDFVALMGPSGSGKTTLLNLIGGLDNPSGGEIEIEGERIDRMSGGQL
ATWRSHHVGFVFQFYNLMPMLTAQKNVELPLLLTSLNAAQRKRNAEIALTLVGLQERRNHKPSELSGGQQQRVAIARAIV
SDPTFLICDEPTGDLDRHNAEEILRLLQELNREHGKTIVMVTHDPKAAEYATHTIHLDKGELADAPLAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCV4089 YP_365820.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-49 49
XCV4089 YP_365820.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-39 46
XCV4089 YP_365820.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-42 44
XCV4089 YP_365820.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-37 42