Gene Information

Name : XCV3756 (XCV3756)
Accession : YP_365487.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4340939 - 4341658 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence :
ATGCTCAAGATGCAAGCGGTCTCCAAGGTCTTCCGCACCGAACAGGTGGAAACGCATGCGCTGCGGTCGCTGGACCTGCA
TGTGCGCGAAGGCGAGTTCGTCGCGGTCACCGGCCCCTCCGGCTCGGGCAAGACCACCTTCCTCAACCTGGCCGGGCTGC
TGGAAACCTTCACCAGCGGGCAGTATTTGCTCGATGGCGAAGACGTCAGCCATCTGTCCGACGATGCACGTTCGCGCCTG
CGCAACCGCAAGATCGGCTTCATCTTCCAGGGCTTCAATCTGATTCCCGACCTCAACCTGTTCGACAACGTCGATGTGCC
GCTGCGGTATCGCGGCATGGCGGCAGCCGAGCGCAAGCAGCGCATCGAAGAGGCATTGACCAAGGTCGGCCTGGGCTCGC
GCCTGCGTCACTACCCCACCGAACTCTCCGGTGGGCAACAGCAGCGCGCTGCGATTGCGCGCGCACTGGCCGGCAGTCCA
CGCTTGCTGCTGGCCGACGAACCCACCGGCAACCTCGATTCGCAAATGGCGCGCGGGGTGATGGAACTGCTGGAAGAGAT
CAACAGCCAGGGCACCACCATCGTCATGGTCACCCACGACCCGGAACTGGCCGCACGCGCGCAGCGCAACGTGCACATCG
TCGACGGGCAGGCCACCGACCTGGAACGCAATCCCAGCCTGATGCGCACGCCTGCCGCCGTTGCAACCCTGGCCGACTGA

Protein sequence :
MLKMQAVSKVFRTEQVETHALRSLDLHVREGEFVAVTGPSGSGKTTFLNLAGLLETFTSGQYLLDGEDVSHLSDDARSRL
RNRKIGFIFQGFNLIPDLNLFDNVDVPLRYRGMAAAERKQRIEEALTKVGLGSRLRHYPTELSGGQQQRAAIARALAGSP
RLLLADEPTGNLDSQMARGVMELLEEINSQGTTIVMVTHDPELAARAQRNVHIVDGQATDLERNPSLMRTPAAVATLAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCV3756 YP_365487.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-39 49
XCV3756 YP_365487.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-43 48
XCV3756 YP_365487.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-32 46