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Name : thiC (XCV3575) Accession : YP_365306.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 4098677 - 4100554 bp Length : 1878 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATGCCGCGCCCACCGTTTTGCAACAACAAGCCCAGTCGTTGTCGGAGGCTGTCACCCAGCCGATTCCCGGTTCACG CAAGATCTTCGTGCAAGGCTCGCGCGCCGATCTGCAGGTGCCGATGCGCGAGATCGCCTTGACGCGCACGCCCACCTTGT TCGGCGGCGAAGAGAATCCGCCGCTCAGCGTCTACGACACGTCCGGGCCTTACACCGATCCGCGGGTGGCGATCGATCTG GCAGCCGGTCTGGCACCGCTGCGTGCGCAGTGGATTGCCGAGCGTGGCGACACCGTCGCCCTGGACGGGCTGAGCTCCAG CTTCGGGCGTGGCCGCGAGCACGATGTGCGTCTGGATGCAGTGCGCTTTCCGGCGCGGCGTCTGCCGCGGGTAGCGCGAC AGGGCGCCAACGTCACCCAGATGCATTACGCGCGCCGCGGCATCATCACGCCGGAAATGGAGTACGTGGCGATCCGCGAA AACCAGCGCCTGGAAGCGGTGACCGATGCAAGCTTGCGCAGGCAGCACCCGGGCCAGGCGTTCGGAGCTTCGATCCAGCA ACGCATTACACCGGAGTTCGTGCGCGAAGAGATCGCACGGGGCCGCGCGATCTTGCCCAACAACATCAATCACCCCGAGA GCGAGCCGATGATCATCGGCCGCAATTTCCTGACCAAGATCAATGCCAACATCGGCAACAGCGCGGTGTCTTCAGGCATT GCCGAAGAGGTCGAGAAGCTGGTGTGGTCGATCCGCTGGGGCGGGGACACGGTCATGGATCTGTCCACCGGCAAGCACAT CCATGAGACGCGCGAATGGATCATCCGCAACTCGCCGGTCCCGATCGGCACGGTGCCGATCTATCAGGCGCTGGAGAAGG TCGATGGACGCGCCGAGGCGCTGACCTGGGAAATTTTTCGCGACACCTTGATCGAGCAGGCCGAACAGGGCGTGGATTAC TTCACCATCCACGCCGGCGTGTTGCTGCGTTACGTACCGCTGACCGCACAGCGCGTGACCGGCATCGTCTCGCGTGGCGG TTCGATCATGGCCAAGTGGTGCCTGGCGCATCACAAGGAGAATTTTCTCTACACGCACTTCGAAGACATCTGCCAGATCA TGAAGGCCTACGACGTGGCGTTTTCGTTGGGCGATGGCCTACGCCCCGGCTGCATCGCCGACGCCAACGACGCGGCGCAA TTCGGCGAGCTGGAAACGCTGGGCGAGCTGACCAAGCTCGCCTGGAAACACGATGTGCAGACCATGATTGAAGGCCCCGG CCATGTGCCGATGCAATTGATCAAGGAAAACATGGACAAGCAGCTGCGCGAATGCGGCGAGGCGCCGTTCTACACCCTGG GGCCGCTGACTACCGACATCGCGCCGGGCTACGACCACATCACCAGCGCGATCGGTGCGGCGATGATCGGCTGGTTCGGC ACCGCCATGCTCTGCTACGTCACTCCGAAAGAGCACCTGGGCCTGCCCAACCGGCAGGACGTGCGCGACGGCATCATGGC CTACAAGATCGCCGCGCATGCCGCCGACCTGGCCAAGGGGCATCCGGGCGCGCAAGTGCGCGACAACGCCTTGAGCAAGG CGCGTTTCGAATTCCGTTGGGACGACCAGTTCCATCTTGGCCTGGATCCGGAAAAGGCCAAGGAGTTCCATGACCAAACC CTGCCCAAGGACGCGCACAAGCTGGCGCACTTCTGCTCGATGTGCGGGCCACACTTCTGCTCGATGAAGATTACCCAGGA CGTGCGTGATTACGCGGCCGAGCACGGCATGAGCGAGGCGCAAGCGCTGTCGACGGGCATGCAGGAAAAGTCCGCGCAAT TTGTCGCGCAGGGCGCGCAGGTCTATCGCGCCACGTGA Protein sequence : MNAAPTVLQQQAQSLSEAVTQPIPGSRKIFVQGSRADLQVPMREIALTRTPTLFGGEENPPLSVYDTSGPYTDPRVAIDL AAGLAPLRAQWIAERGDTVALDGLSSSFGRGREHDVRLDAVRFPARRLPRVARQGANVTQMHYARRGIITPEMEYVAIRE NQRLEAVTDASLRRQHPGQAFGASIQQRITPEFVREEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI AEEVEKLVWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEALTWEIFRDTLIEQAEQGVDY FTIHAGVLLRYVPLTAQRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICQIMKAYDVAFSLGDGLRPGCIADANDAAQ FGELETLGELTKLAWKHDVQTMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRWDDQFHLGLDPEKAKEFHDQT LPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGMSEAQALSTGMQEKSAQFVAQGAQVYRAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 70 |
