Gene Information

Name : XCV3136 (XCV3136)
Accession : YP_364867.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Virulence
Product : amino acid-polyamine-organocation superfamily protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 3555666 - 3557048 bp
Length : 1383 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGACACGCCCCGCCGCGACGATGCGGCCACGCTGCAACGCTTCGGCTACGCACAGGAGCTCAAGCGGCAGCTCAC
GCTGAAGGATCTGTTGATCTACGGGCTGGTGTGCATGGTGCCCACGGCGCCGTTCTCGATCTTCGGCGGCGTCTTCGACA
TCAGTGCCGGGATGGTGCCGCTGACCTACCTGGTCGGCTTCGTGGCAATGCTGTTCACCGCACTGAGCTACCAGCAGATG
TCGCAGGCATTTCCGGTGGCCGGTTCGGTGTATGCCTATGTCGGGCGCGGGCTGAGCAGCGGCATGGGATTTCTGGCTGG
CTGGGCGATTCTGCTCGACTACCTGCTGGTGCCGACCCTGTTGTACGTGGTCGGCGCCAATGCGATGCAGACCGTATTGC
CGGCGATACCGCAGCCGGCGTGGATTGGGTTCTTCGTGGTGCTCAACACGGTGGTGAACCTGCGTGGCATCGAAACCACC
GCACGCGCCAACCGCTTTTTCCTGCTTGCGCAGTTGCTGGTCCTGGCGGTGTTCGTGGTGCTGGCGACGCTGGCGATCCA
GCGCGGCGTCAATGGGGCGCACTGGAGCTGGCGCCCCCTGTATAACCCGCAGGCGTTTTCTCCGCAGCTGATCTTCAGCG
CGTTGTCGGTGGCGGTGGTGTCGTTCCTCGGCTTCGATGCGATCTCCACCATGTCCGAGGAAGCGCGCGGCGGCAACCGC
GTGGTGGGGCGCGCAACCTTGCTGGCCTTGCTGATCGTGGCAGGGCTGTTCATCCTGCAAACCTGGCTGGCGGCATTGCT
GCAGCCTACCCTGCAGCGCTACCCAAGCGCGCAGGCATCCAACGATGCGTTCTTCGAGATCGGGCGGTTGATCGCCGGGC
CATGGCTGCAAATTGTCATTGCGCTCACGGTGGCGATCAGCGCGGCAATCGCCAATTCATTGGTTGCACAGGCGGCCACG
TCGCGACTGTTGTTCGCCATGGCGCGCGACCGGCAGTTGCCGGGCTTTCTGCGCTATATCCACCCGCGCACCGGCGTACC
GCAGCGTGCGATCCTGCTGGTGGCGGGCCTGAGCCTGGTACTGGGCGAAGTCTTCGTCGGGCAGATCGCGCTGCTGTCGT
CGCTGTGCAACGTCGGCGCACTGACCGCCTTCGTGTTGCTGCATATCGCAGTGCTGTGGCACTTCCGCACCCACGGCCGG
CGTGTGCTGCATGGCGTGGTGCCCCTGATCGGGATCGTCATCCTGGCCTACGTACTGCTCAATGCCGACCTGCATGCACA
ACTGGGCGGCGCTGCGTGGATGGCGGTGGGGCTGACGGTCCTGGCGTTTCTGAAACTCAGCGGACGCTCCACCGAATTGC
GCGCCAGCGACGCGCTGGAATAG

Protein sequence : 
MTDTPRRDDAATLQRFGYAQELKRQLTLKDLLIYGLVCMVPTAPFSIFGGVFDISAGMVPLTYLVGFVAMLFTALSYQQM
SQAFPVAGSVYAYVGRGLSSGMGFLAGWAILLDYLLVPTLLYVVGANAMQTVLPAIPQPAWIGFFVVLNTVVNLRGIETT
ARANRFFLLAQLLVLAVFVVLATLAIQRGVNGAHWSWRPLYNPQAFSPQLIFSALSVAVVSFLGFDAISTMSEEARGGNR
VVGRATLLALLIVAGLFILQTWLAALLQPTLQRYPSAQASNDAFFEIGRLIAGPWLQIVIALTVAISAAIANSLVAQAAT
SRLLFAMARDRQLPGFLRYIHPRTGVPQRAILLVAGLSLVLGEVFVGQIALLSSLCNVGALTAFVLLHIAVLWHFRTHGR
RVLHGVVPLIGIVILAYVLLNADLHAQLGGAAWMAVGLTVLAFLKLSGRSTELRASDALE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 8e-65 42
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 8e-65 42
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 2e-65 42
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 2e-65 42
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 1e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCV3136 YP_364867.1 amino acid-polyamine-organocation superfamily protein VFG0480 Protein 3e-65 42