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Name : XCV2615 (XCV2615) Accession : YP_364346.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2949436 - 2950650 bp Length : 1215 bp Strand : + Note : - DNA sequence : ATGCCTCTCACCGATACCGCCATCCGTAAAGCGAAACCCACCGCTACGCCCCAGAAGCTGCGCGACGGCAACGGCCTGTA TCTCCTGCTACGACCCGACGGCGCACGCTGGTGGCGCTACGACTATCGCCGCCCGGTCACCGGCAAGCGCAACACTCTGT CGTTCGGCACCTACCCGGAAGTGAGCCTCTCGGACGCGCGGGAGAGGCTGGCTGAAGCGCGCCGCCTACTCGCGGCCAAG ATCGACCCCGGCGAACAGCGGAAGGCCGTCAAGGCCGCTGGGGAGGCCGCCGCCGCGAACAGCTTCGAGGTCATCGCCCG CGAGTGGTTCGCCAAGCAGCAGAAGGATTGGAGTACCCAGTACGCGGACAAGATCATCCGCCGCTTGCAGAGCGACATTT TTCCCTGGATCGGCAGCAGCCCCATTGCAGCCATTACCGCCCCGGAACTGCTGAAGCACTTGGAGCGGATCGAACAGCGA GGCGCAATCGAGACGGCGCACCGCGCCTTGCAGACTTGCGGTGCGGTCTTCCGCTATGCAGTGCGCACCGGACGGGCGGA AGCCGATCCTACGGGCGCACTCAAGGGAGCATTGACTCCCTGGCGCTCCATGCCTTTCGCTGCTGCCACCACTTCAGAGG AGGCGACGACCTTACTGCGGAAGATCGACATCAGCACCAGTCGGCCAGTGGTGAGGAGCGCCCTGCGACTAGCACCATTG CTGTTCTCCAGACCCGGCGAGCTTGTGCGCATGAGGTGGACGGAACTAGACCTTGATGCCGGACAGTGGCGTTACTTTGT GACCAAGACCAAGCGTACCCATATCGCCGCACTCTCGACTCAGGCAGTGGAAATCCTGCGCGATCTACACCCTCTTACCG GGCGCGGCGAGTTCGTTTTCCCTGGTGGACGTGACCCGCGCAAGCACATGTCTGGCAACGCCATTCTAGTTGCCGCGAGG CGCTGCGGCATCGAGAAGGAAGAAAGCACCATTCATGGTTTCCGACACATGGCGAGCACACTGCTCAATGAAATGGGCGA CTGGAATCCAGATGCAATCGAGGCAGCGTTGACCCACAAGATGCCTGGCGTACGTGGCATCTACAATCAAGCTCAGTATT TGGATGAACGCCGCAAGATGATGCAGGCTTGGGGCGACTACCTAGATGAACTGAAATCAATGCGCCAGAAGCCCGTAATA CACGAGGCTGCGTGA Protein sequence : MPLTDTAIRKAKPTATPQKLRDGNGLYLLLRPDGARWWRYDYRRPVTGKRNTLSFGTYPEVSLSDARERLAEARRLLAAK IDPGEQRKAVKAAGEAAAANSFEVIAREWFAKQQKDWSTQYADKIIRRLQSDIFPWIGSSPIAAITAPELLKHLERIEQR GAIETAHRALQTCGAVFRYAVRTGRAEADPTGALKGALTPWRSMPFAAATTSEEATTLLRKIDISTSRPVVRSALRLAPL LFSRPGELVRMRWTELDLDAGQWRYFVTKTKRTHIAALSTQAVEILRDLHPLTGRGEFVFPGGRDPRKHMSGNAILVAAR RCGIEKEESTIHGFRHMASTLLNEMGDWNPDAIEAALTHKMPGVRGIYNQAQYLDERRKMMQAWGDYLDELKSMRQKPVI HEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 4e-57 | 42 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 4e-57 | 42 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 5e-57 | 42 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 5e-57 | 42 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 1e-57 | 42 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 1e-57 | 42 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 2e-56 | 42 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 4e-55 | 42 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 4e-55 | 42 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 3e-55 | 42 |
| SESS1296_03598 | AFO66301.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-59 | 42 |
| SESS1635_03816 | AFO66367.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-59 | 42 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 3e-50 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XCV2615 | YP_364346.1 | integrase | VFG0783 | Protein | 2e-57 | 42 |
| XCV2615 | YP_364346.1 | integrase | VFG0598 | Protein | 2e-55 | 42 |
