Gene Information

Name : XCV2417 (XCV2417)
Accession : YP_364148.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 2741536 - 2742828 bp
Length : 1293 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCGGCATCACGCTTCTCGCCCCCCCACAGGGGCGCATCGCCGTCATCGGCTTGGGTTATGTCGGCCTGCCGTTGGC
GGTTGCATTCGGGGAGCAGCGCGACACCCTGGGCTTTGACATCGATGCGCAGCGCGTTGCGCAATTGCGCGATGGCCACG
ATGCCACGCTGGAACTGGACGATGCCGAATTGGCTGCCGCAACGCAGTTACGCTACAGCGCAAACGCCGCGGATCTGGCC
GCGTGTCGCATTTTCATCGTGACCGTGCCAACGCCGATCGACAGCTTCGAGCAACCGGATCTGGAGCCGTTGCGTAGCGC
CACGGCTTTGATCGCCGCCGCCCTCAAGCCCGGCGACCTGGTGATCTACGAATCCACGGTCTATCCAGGAACCACCGAAG
AAGTGTGCGTGCCCTTGCTCGAAGCAGGCTCCGGGTTGCGTTTCAACCACGACTTCTTTTGCGGTTACAGCCCCGAGCGT
GTCAATCCCGGCGATCGCCAGCGGCGTCTGCGCGACATTCGCAAGATCACCTCGGGCTCGACGGCGGACGCCGCTGATGC
AGTCGACGCGCTGTACACCAGCATCATCACTGCCGGCACCTGGCGCGCTCGGTCGATGCGCGTGGCCGAAGCGGCAAAGG
TGGTCGAAAACATCCAGCGCGACGTCAATATCGCACTGGTCAATGAGTTGGCGTTGATTTTCGACAAGTTGGGAATCGAC
ACCTTGGATGTGCTCGAGGCCGCAGGAACCAAGTGGAATTTCCTGCCGTTTCGCCCTGGCCTGGTCGGTGGGCATTGCAT
CGGCGTGGATCCGTACTACCTGATGCACAAGTCCGAAAGCGTGGGCTATCACCCGGACCTGATCCACACCGCGCGGCAGG
TCAACAATCGGGTCGGCCGACATGTGGCCGAGCGCGTGTGCGGCATGCTGGCCATGCGTGGCGTCGCGCTCGCGCAGGCG
CGGGTGCTGGTACTGGGCGCCACATTCAAGGAAAACTGCCCGGATCTGCGCAACAGCCGCGCCCTGGAATTGGTGCAGTT
GCTGCAGGCCGGGGGTGTGCAGGTGGACACTTGCGACCCGTGGGCAGACCCGGCTGAAGCGCTGCAGCACGGCGGTGTGC
ATTTAAGCCAGACGCCGGAAGAGGGCGCCTACGATGCCGTGGTGCTGGCAGTGGCGCACGCGCAGTATCGCGACTACGAC
GTCGCGCAGATCGCCGCGCTCGGCAAGCCGGGCGCGGTGGTGTACGACGTCAAATCGGTGTGGCCGCGTGCGGCAGTCAG
CGATCGTCTGTAG

Protein sequence : 
MSGITLLAPPQGRIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLRDGHDATLELDDAELAAATQLRYSANAADLA
ACRIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTTEEVCVPLLEAGSGLRFNHDFFCGYSPER
VNPGDRQRRLRDIRKITSGSTADAADAVDALYTSIITAGTWRARSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGID
TLDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLMHKSESVGYHPDLIHTARQVNNRVGRHVAERVCGMLAMRGVALAQA
RVLVLGATFKENCPDLRNSRALELVQLLQAGGVQVDTCDPWADPAEALQHGGVHLSQTPEEGAYDAVVLAVAHAQYRDYD
VAQIAALGKPGAVVYDVKSVWPRAAVSDRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-108 51
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-108 51
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-91 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCV2417 YP_364148.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 5e-109 51