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Name : topB2 (XCV2406) Accession : YP_364137.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2730083 - 2732095 bp Length : 2013 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGGCTGTTCTTGTGCGAGAAGCCCTCCCAGGGCAAAGACATTGGCCGGATTCTCGGCGCGACGCAGCGCGGTGAAGG CTGTCTCAGCGGCTCTGGCGTCACCGTTACCTGGTGCATCGGCCATCTCGTAGAAGCGGCAGCTCCCGAGGTCTATGACG CGGCGCTCAAGCGCTGGTCGCTGGAGCAGTTGCCCATTGTTCCGCAGCAGTGGCGGGTCGAGGTCAAACCGAAGACCGCC ACGCAATTCAAGGTCGTCAAGGCGCTTCTGGCGAAGGCGACCCATCTGGTCATCGCCACCGATGCCGACCGTGAGGGCGA GCTGATCGCCCGCGAGATCATCGACCTGTGCGGCTACCGCGGCCCCATCGAGCGGCTATGGTTGTCGGCGCTCAACGATG CGTCGATCCGCACCGCGCTCGGCAAGTTGCGGCCCTCATCCGACACGCTGCCGATGTACTACTCGGCGCTTGCGCGCTCA CGCGCCGACTGGCTCGTGGGCATGAACCTCAGCCGGTTGTTCACGGTGCTCGGGCGTCAGGCCGGCTACGACGGCGTGCT GTCCGTCGGTCGCGTCCAGACGCCGACCTTGAAGCTCGTCGTGGACCGCGACCGCGAGATCGCGGCCTTCAAGTCGGTGC CGTTCTGGGCCATCGACGTGTCCCTGTCCGCAGGTGGACAGGCTTTCAGCGCGCAGTGGGTTCCGCCCGATGGCTGCACC GACGATGCCGGCCGCTGCCTGCAGCAGCCTATCGCCCAGCAGGCCGCGCAGCAGATCCGCGCTGCGAGCAGCGCCCAGGT CGTGTCAGTCGAGACCGAGCGCGTGCGCGAAGGGCCACCGCTGCTGTTCGACCTGGGAACGCTTCAGGAGGTTTGTTCCA AGCAGCTTGGGCTGGATGTGCAGGAGACGCTGGAGATCGCCCAGGCCCTGTATGAGACCCATAAAGCCACCACGTACCCG CGTTCCGATTCGGGCTACCTGCCCGAAAGCATGTTCGCCGAGGTGCCGACTGTTCTGGACAGCCTGCTCAAGACCGACCC CTCGCTGCGCCCGATCATGGGCCAGCTCGACCGCTCCCAGCGCTCGCGCGCCTGGAACGACGGCAAAGTGACGGCGCACC ACGGCATCATTCCCACCTTGGAACCCGCGAACCTCTCGGCTATGAGCGAGAAGGAACTGGCGGTGTACTGGCTGATCCGC GCGCATTACCTGGCGCAGTTCCTCCCTCACCACGAGTTCGACCGCACGATCGCCGAGCTGTCCTGCGGCCAGCAGAAGCT GGTGGCCACCGGAAAGCAGGTGGCCGCCCAGGGTTGGCACCTGGTGCTGGCCGAGCCGCAAGCGGACGAGGACGGGGAAA CCACCGCGCGCAGCCAGGTACTCCCCGCGCTGCGCGAGGGCCTGGCATGCCAAGTGGCCGAGGCCGAAGTCAAGGCGCTC AAGACGCTGCCTCCGAAGCCCTACACGCAGGGCGAACTGGTCAAGTCGATGAAAGGCGTGGCGCGCTTCGTGACCGACCC GCGCCTGAAGCAGAAGTTGAAGGACACGACGGGCATTGGCACCGAAGCCACGCGCGCCAACATCATCACCGGCCTGCTGA CGCGGGGCTATCTCGTGAAGAAAGGACGCTCCATTCGCGCATCGGATGCGGCATTCACGCTGATCGACGCTGTGCCCGCG GCGATTGCCGACCCCGGAACCACCGCCGTGTGGGAGCAGGCGCTCGACATGATCGAGGCCGGACAGCTCACCCTGGATGT GTTCATCGGCAAGCAGGCCGCATGGATTTCGCAACTGATCGTGCAGTACGGCAGCACCTCGCTGTCCATCAAGGTTCCCC AGGGTCCCGCTTGCCCGCAGTGCGGCGCACCGACGCGCCAGCGCACCGGCAAGACCGGCCCCTTCTGGTCGTGCAGTCGC TACCCCGACTGCAAAGGCACGCTGCCGGTCGATTCCGGCACGTCCAAGCGCGGTGCCTCGCGCCCGCGCAGTAGCGGCCG CAAGGGCTCCTGA Protein sequence : MRLFLCEKPSQGKDIGRILGATQRGEGCLSGSGVTVTWCIGHLVEAAAPEVYDAALKRWSLEQLPIVPQQWRVEVKPKTA TQFKVVKALLAKATHLVIATDADREGELIAREIIDLCGYRGPIERLWLSALNDASIRTALGKLRPSSDTLPMYYSALARS RADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSAGGQAFSAQWVPPDGCT DDAGRCLQQPIAQQAAQQIRAASSAQVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDVQETLEIAQALYETHKATTYP RSDSGYLPESMFAEVPTVLDSLLKTDPSLRPIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPANLSAMSEKELAVYWLIR AHYLAQFLPHHEFDRTIAELSCGQQKLVATGKQVAAQGWHLVLAEPQADEDGETTARSQVLPALREGLACQVAEAEVKAL KTLPPKPYTQGELVKSMKGVARFVTDPRLKQKLKDTTGIGTEATRANIITGLLTRGYLVKKGRSIRASDAAFTLIDAVPA AIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLIVQYGSTSLSIKVPQGPACPQCGAPTRQRTGKTGPFWSCSR YPDCKGTLPVDSGTSKRGASRPRSSGRKGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 89 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 76 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 62 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-166 | 50 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-166 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 4e-166 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 4e-166 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 3e-167 | 50 |
