Gene Information

Name : XCV2386 (XCV2386)
Accession : YP_364117.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Unknown
Product : helicase
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 2714086 - 2716365 bp
Length : 2280 bp
Strand : -
Note : -

DNA sequence :
ATGTCCCTCGATCTCGAAACCACCGCCGCTGAAGCCACGCCCGTACAGGGCGAACTGCTCGATGCGGAATCTTCCCCTCT
GACCCTGAGCCTTCAGGATTTCGTCGGCGAATTCGGCGACGAACTGCTCGACGCCCTCAACAGCGCAAACCCGCCGGTCT
ATAACGGCCAGCCACAGACGCGCCGGCAACTCATCGTCGCCGGCCTCAAGCGCAAGCTGTTCCCGGCCCAGGCCGAAGTT
GTCCACGCCGCTGCCGAATTGCTGATCGACCGTGGCGAACGCGCTGCGATCGTCAACGGCGAGATGGGCTGCGGCAAGAC
GACCGTCGGCATCGCCACGGCCGCGGTGCTCAACGCCGAAGGCTACCGCCGCACCCTAGTTCTCTCGCCACCGCACCTTG
TTTACAAGTGGCGGCGTGAGATCCAGGAAACCGTAGCAGGTGCCAAGGTCTGGGTGCTCAACGGACCGGATACGCTGGTC
AAACTCATCAAGCTGCGCGAGCAGTTGGGTGTACACCCCACGGGCCAGGAGTTCTTCATCCTGGGGCGCGTGCGGATGCG
GATGGGGTTCCACTGGAAGCCCGTCTTCACCCAGCGGCGTACCCGCCACGGCCACGTGGCTGCGTGCCCGGACTGCGGCA
CGGTCATCACCGACCTCGATGGCGAGCCGGTCAATCCGGTCGCGCTCCAAGCCGAGGAATACCGCAGGAAGTGCAGCCAT
TGCGCCGCGCCCCTGTGGACGCTGATCCGCCCGCGCAGCCTGTCCGGCAGCGACCAGTCCTCGGCCGTGCTGAAAGCCTT
GAAGCGCATCCCGACGATCGGGGAAGTCACCGCGCAGAAGCTGATGCAGAAGTTCGGCGACGGGTTCCTGGCGTCGATGC
TGGGCGACAACATCCACGAGTTCATCAACTTGATGGATGGCAACGGCGAACTGGTCTTCTCTGACCGCCAGGCGCATCGC
ATGGAAAGAGCGATGGCCAACATGGAGTTCGGCTTCGGCGAAGGCGGCTACCAGCCGTCCGAGTTCATCAAGCGCTACCT
GCCACAGGGCACGTTCGACCTGCTCATCGCCGACGAGGCGCACGAGTACAAGAACGGTGGCAGCGCCCAAGGCCAGGCCA
TGGGCGTGCTGGCGGCGAAGGCTCGCAAGACCTTGCTGCTGACCGGCACGTTGATGGGCGGCTACGGCGACGACCTGTTC
CACCTGCTGTTCCGGGCACTGCCTGGACGGATGATCGAAGACGGCTACCGCCCGAGCACGAGTGGGAGCATGACTTCGGC
CGCGATGGCGTTCATGCGCGATCACGGCGTCCTGAAGGACATCTACTCCGAGAGCGCCGGCACGGCGCACAAGACGGCCA
AGGGCACCAAGGTATCGGTGCGCACGGTCAAGGCTCCCGGCTTCGGGCCGAAAGGGGTCTTGCGGTGCATCCTGCCGTTC
ACGATTTTCCTCAAGCTCAAGGACATCGGTGGCAACGTCCTGCCGCCGTATGACGAGGAGTTCCGTGAAGTCGCAATGGA
CACGGCGCAAGCCGCGGCCTACCGCGACCTGGCGGGTCGGCTGACCGCGGAGCTGAAACAGGCTCTGGCGCGACGCGATA
CGACGCTGCTGGGCGTGGTGCTCAACGTGCTGCTTGCCTGGCCGGACTGTTGCTTCCGGTCGGAAACCGTGGTGCATCCG
CGCACGCGCAACACCTTGGCGTTCGTCCCGGCTCAGTTCAACGAGTTCGAGGTGACGCCGAAAGAGCGCGAGCTGATCGA
CATCTGCAAGGAAGAGAAGGCGCAGGGCCGCAAGGTCTTGGCGTACACGGTCTATACCGGCACGCGCGACACCACATCGC
GCTTGAAGGTGCTGCTGGAACAAGAAGGTTTTCGGGTGGCGGTGCTGCGCGCAAGCGTGGACGCCAGCCGCCGCGAGGAC
TGGATCGCCGAGCAACTGGACCGTGGCATCGACGTGCTCATCACCAACCCCGAGCTGGTCAAGACGGGCTTGGACCTGTT
GGACTTCCCGACGATCGTTTTCATGCAGTCGGGCTACAACGTGTACTCGCTCCAGCAGGCGGCACGCCGCTCCTGGCGCA
TCGGACAGAAACAGCCGGTGCGCGTGATCTACCTCGGCTACGCCGGTTCCTCGCAGATGACCTGCCTGGAGCTGATGGCC
AAGAAGATCATGGTCTCGCAGTCCACCTCGGGCGACGTACCCGAATCGGGCCTGGATGTGCTCAACCAGGACGGTGATTC
CGTCGAGGTCGCATTGGCCCGGCAACTGGTCGCCGCCTGA

Protein sequence :
MSLDLETTAAEATPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYNGQPQTRRQLIVAGLKRKLFPAQAEV
VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV
KLIKLREQLGVHPTGQEFFILGRVRMRMGFHWKPVFTQRRTRHGHVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSH
CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQAHR
MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF
HLLFRALPGRMIEDGYRPSTSGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF
TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP
RTRNTLAFVPAQFNEFEVTPKERELIDICKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFRVAVLRASVDASRRED
WIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 98
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 88
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 71
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 71
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 71
yea AAW83099.1 Yea Not tested GGI Protein 7e-175 50