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Name : topB (XCV2287) Accession : YP_364018.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2621288 - 2623300 bp Length : 2013 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGGCTGTTCTTGTGCGAGAAGCCTTCCCAGGGCAAAGACATTGGCCGGATTCTCGGCGCCACGCAACGCGGTGAAGG CTGCCTCAACGGTTCCGGCGTCACCGTCACCTGGTGCATCGGCCATCTCGTAGAGGCGGCGGCACCCGAAGCCTACGACG AACAGCTAAAGCGCTGGTCCATCGAGCAGTTGCCCATCATTCCCCAGCGTTGGCAGGTCGAGGTCAAACCGAAAACCGCC ACGCAATTCAAGGTCGTCAAGGCGCTACTGGCGAAGGCAACACAGCTTGTCATCGCCACCGATGCCGACCGCGAAGGCGA ACTGATCGCCCGCGAGATCATTGACCTGTGCGGCTACCGCGGCCCCATCGAGCGGCTGTGGTTGTCGGCACTCAACGATG CGTCCATTCGCGCCGCGCTAGGCAAGCTCCGGCCATCGGCCGAGACGCTGCCGATGTACTACTCGGCACTAGCGCGCTCG CGTGCGGACTGGCTTGTGGGCATGAACCTCAGTCGGTTGTTCACGGTGCTGGGTCGGCAAGCCGGCTACGACGGAGTGCT GTCGGTCGGTCGCGTCCAGACCCCGACGCTCAAGCTGGTCGTGGACCGCGACCGCGAGATCGCGGCCTTCGTGTCCGTGC CGTACTGGGCCATCGACGTGTACCTGACCACAAGCGGCCAAGCCTTCACCGCGCAGTGGATTTCGCCCGACACCTGCACC GACGACTCGGGCCGCTGCCTGCAGCAGCCGGTGGCACAGCAGGCGGCGCAGCAGATCCGCGCCACCGGCAGTGCCCAGGT TGTCTCGGTCGAAACCGAGCGCGTGCGTGAAGGCCCGCCGCTGCCGTTCGACCTGGGCACCTTGCAGGAGTTGTGTTCCA AGCAGCTTGGGCTGGATGTGCAGGAAACCTTGGACATCGCTCAGGCCCTGTACGAAACGCACAAGGCCACGACCTATCCG CGCTCGGATTCCGGCTACCTGCCGGAGAGCATGTTTGCCGAAGTCCCCATAGTCCTCGACAGCCTGCTCAAGACCGATTT CTCGCTGCGCCCGATCATTGACCAACTCGACCGCACACAACGCTCACGCGCTTGGAACGACGCGAAGGTATCCGCGCACC ACGGCATCATCCCGACGCTCGAACCGGCGAACCTCTCGGCCATGAGCGAGAAGGAACTGGCGGTGTACAAGCTCATCCGG GCGCACTACCTCGCGCAGTTCCTTCCTCACCACGAGTTCGATCGCACAGTGGCGAACCTCTCTTGCGGCCAGCAGACGCT GACGGCCACAGGAAAGCAGGTGGTCGTCAAGGGCTGGCGCCTGGTGTTGGCCGAACCGCAACCCGAGGAGGATAGCGACA CCGCGGCGCGCAGCCAGGTGCTGCCCGCGCTACGCGAGGGCGTGTCATGCCAGGTAGCCGATGTCGATCTGAAGGCGCTC AAGACACAGCCATCTCGACCCTACACGCAGGGCGAATTGGTCAAGTCCATGAAAGGCGTCGCCAAGCTGGTCTCGGATCC GCGCTTGAAACAGAAGCTCAAGGATACGGTCGGCATCGGCACCGAAGCGACACGGGCTAACATCATCAGCGGCCTGATCG CACGCGGCTATCTCATGAAGAAGGGGCGCGCGATTCGCGCCTCGGATGCGGCATTCACCCTCATCGACGCCGTGCCCGCA GCGATTGCCGACCCCGGGACCACCGCCGTATGGGAACAAGCGCTAGACATGATCGAAGCGGGACAACTCACGCTGGACGT GTTCATCGGCAAGCAGGCCGCATGGATTTCGCAGTTGATCACGCAGTACGCCAGCGCGTCCCTGTCAATCAAGGTTCCCC ATGGGCCGGCTTGCCCGCAGTGCGGCGCACCCACGCACCAGCGCAGTGGCAAGAGCGGCCCGTTCTGGTCGTGCAGTCGC TATCCAGACTGCAAAGGCACGCTGCCGGTCGAGTCCGGCACGTCCAAGCGCGTAGCCTCACGCTCGCGCCGTGGCGGCCG AAAAGACTCCTGA Protein sequence : MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWSIEQLPIIPQRWQVEVKPKTA TQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYRGPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARS RADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFTAQWISPDTCT DDSGRCLQQPVAQQAAQQIRATGSAQVVSVETERVREGPPLPFDLGTLQELCSKQLGLDVQETLDIAQALYETHKATTYP RSDSGYLPESMFAEVPIVLDSLLKTDFSLRPIIDQLDRTQRSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAVYKLIR AHYLAQFLPHHEFDRTVANLSCGQQTLTATGKQVVVKGWRLVLAEPQPEEDSDTAARSQVLPALREGVSCQVADVDLKAL KTQPSRPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIISGLIARGYLMKKGRAIRASDAAFTLIDAVPA AIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLITQYASASLSIKVPHGPACPQCGAPTHQRSGKSGPFWSCSR YPDCKGTLPVESGTSKRVASRSRRGGRKDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 89 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 76 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 63 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-167 | 50 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-167 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-167 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 9e-168 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 3e-167 | 48 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 1e-122 | 41 |
