Gene Information

Name : glnA (XCV0188)
Accession : YP_361919.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 224077 - 225486 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGTGGAAAATGTTGAAAAGCTGATCAAGGACAACAAGGTCGAGTTCGTCGACCTGCGCTTCGTCGATATGCGTGG
TGTACAGCAGCACATCACCTTTCCGGTCAATATCATCGAGCCGGCGCTGTTTGAAGAAGGCAAGATGTTCGACGGCAGTT
CGATCGCGGGCTGGAAGGGCATCAACGAGTCGGACATGGTGTTGCTGCCGGACGCGGGCACCGCGTATCTGGATCCGTTC
TTCGCCGATCCGACCATCGTGCTGACCTGCGACATCCTCGACCCGGCCACCATGCAGAGCTATGAGCGCGACCCGCGCGG
CATCGCCAAGCGCGCCGAGGCCTACCTGAAGTCCTCCGGCACCGCAGACCAGGCGTTCTTCGGCCCGGAGCCGGAATTCT
TCATCTTCGATTCGGTGCGCTTTGCCAACGACATGGGCCACACCTTCTTCCAGGTGGGTTCGGAAGAGGCGGCCTGGAAC
ACCGGCGAAAAGTACGACGGCGGCAACAGCGGTTACCGCCCGGGCGTGAAGGGCGGCTACTTCCCGGTTCCGCCGACCGA
CAGCCTGCACGACCTGCGCGCGGAAATGATCAAGACGCTGGAACAGGTCGGCATCGAAACCGAGGTGCACCACCACGAAG
TGGCCACCGCCGGCCAGTGCGAGATCGGCACCAAGTTCAGCTCGCTGGTGCAGAAGGCCGACGAACTGCTGACGATGAAG
TACATCATCAAGAACGTCGCCTACCGCAACGGCAAGACCGCCACCTTCATGCCCAAGCCCATCGTGGGCGACAACGGCTC
GGGCATGCACGTGCACCAGTCGCTGGCCAAGGGCGGCGTCAACCTGTTCACCGGCGACGGCTACGGCGGCCTGTCGCAGC
TGGCGCTGTGGTACATCGGCGGCATCTTCAAGCATGCCCGCGCGATCAACGCCTTCGCCAACTCCGGCACCAACAGCTAC
AAGCGCCTGGTTCCGGGCTTCGAGGCGCCGGTGATGCTGGCCTATTCGGCGCGTAACCGTTCGGCCTCGTGCCGCATTCC
GTGGGTCACCAACCCGAAGGCGCGCCGCATCGAAATGCGCTTCCCCGATCCGTTGCAGTCCGGCTACCTGACCTTCACCG
CGCTGATGATGGCCGGCCTGGACGGCATCAAGAACCAGATCGACCCGGGCGCCCCGAGCGACAAGGACCTGTACGACCTG
CCGCCGGAAGAAGAGAAGCTGATCCCGCAGGTGTGCTCCAGCCTGGACCAGGCCCTGGAAGCGCTGGACAAGGACCGCGA
GTTCCTCAAGGCCGGCGGCGTGATGAGCGACGACTTCATCGACGGCTATATCGCGCTGAAGATGCAGGAAGTCACCAAGT
TCCGTGCTGCGACCCACCCGTTGGAGTACCAGCTGTACTACGGCAACTGA

Protein sequence :
MSVENVEKLIKDNKVEFVDLRFVDMRGVQQHITFPVNIIEPALFEEGKMFDGSSIAGWKGINESDMVLLPDAGTAYLDPF
FADPTIVLTCDILDPATMQSYERDPRGIAKRAEAYLKSSGTADQAFFGPEPEFFIFDSVRFANDMGHTFFQVGSEEAAWN
TGEKYDGGNSGYRPGVKGGYFPVPPTDSLHDLRAEMIKTLEQVGIETEVHHHEVATAGQCEIGTKFSSLVQKADELLTMK
YIIKNVAYRNGKTATFMPKPIVGDNGSGMHVHQSLAKGGVNLFTGDGYGGLSQLALWYIGGIFKHARAINAFANSGTNSY
KRLVPGFEAPVMLAYSARNRSASCRIPWVTNPKARRIEMRFPDPLQSGYLTFTALMMAGLDGIKNQIDPGAPSDKDLYDL
PPEEEKLIPQVCSSLDQALEALDKDREFLKAGGVMSDDFIDGYIALKMQEVTKFRAATHPLEYQLYYGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-106 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_361919.1 glutamine synthetase, type I VFG1399 Protein 2e-108 51