Name : rplS (XCV1345) Accession : YP_363076.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1509999 - 1510406 bp Length : 408 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAGCAAACTCAACAAGACCATCCTGGCTGACTTCGAAGCCGCCCAGATCCAGCGCAAGCTGCCGGAATTCAACCAGGG CGACACCGTTGTGGTGAACGTCAAGGTTAAGGAAGGCAACCGCGAGCGCGTGCAGGCCTATGAGGGCGTGGTGATCGGGA CCAAGAATGCCGGCCTGAACTCCTCCTTCACCGTGCGCAAGATCTCGCACGGCTTCGGCGTCGAGCGCGTGTTCCAGACC CACAGCGCCATCATCGACTCGGTCGAAGTGAAGCGTCGCGGTAAGGTGCGCGCCGGTAAGCTGTACTACCTGCGTGGTCT GGAAGGCAAGGCTGCCCGCATCAAGGAAGATCTGGCCGCCGCTGCGCAGGCCAAGGCCGCTCGCCAGGCTGCTGCCAAGG TCGAGTAA Protein sequence : MSKLNKTILADFEAAQIQRKLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLNSSFTVRKISHGFGVERVFQT HSAIIDSVEVKRRGKVRAGKLYYLRGLEGKAARIKEDLAAAAQAKAARQAAAKVE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 4e-29 | 61 |
rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-26 | 55 |