Gene Information

Name : rplS (XCV1345)
Accession : YP_363076.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1509999 - 1510406 bp
Length : 408 bp
Strand : +
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGAGCAAACTCAACAAGACCATCCTGGCTGACTTCGAAGCCGCCCAGATCCAGCGCAAGCTGCCGGAATTCAACCAGGG
CGACACCGTTGTGGTGAACGTCAAGGTTAAGGAAGGCAACCGCGAGCGCGTGCAGGCCTATGAGGGCGTGGTGATCGGGA
CCAAGAATGCCGGCCTGAACTCCTCCTTCACCGTGCGCAAGATCTCGCACGGCTTCGGCGTCGAGCGCGTGTTCCAGACC
CACAGCGCCATCATCGACTCGGTCGAAGTGAAGCGTCGCGGTAAGGTGCGCGCCGGTAAGCTGTACTACCTGCGTGGTCT
GGAAGGCAAGGCTGCCCGCATCAAGGAAGATCTGGCCGCCGCTGCGCAGGCCAAGGCCGCTCGCCAGGCTGCTGCCAAGG
TCGAGTAA

Protein sequence :
MSKLNKTILADFEAAQIQRKLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLNSSFTVRKISHGFGVERVFQT
HSAIIDSVEVKRRGKVRAGKLYYLRGLEGKAARIKEDLAAAAQAKAARQAAAKVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 4e-29 61
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 3e-26 55