Gene Information

Name : XCV1114 (XCV1114)
Accession : YP_362845.1
Strain : Xanthomonas campestris 85-10
Genome accession: NC_007508
Putative virulence/resistance : Unknown
Product : ISxcc1 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1245842 - 1246585 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence :
ATGCGCTATCAACGTCGTCCCGATCGGGATGATGAGGTTATTGCGCTGTTGTCCGAATTGGCCGAGCGTTTTCCTGAGCG
TGGATTTGGAAAACTTTTTCAAATCATCCGCCGTCGCGGACATGTGTGGAACCACAAGAGGGTCTGGCGCGTGTATTGCC
TGATGAAGCTCAATCAACGTCGTCGCAGCAGGCGCCGGGTACCGACGCGTCATCCACAGCCGCTGGCATGCGGTGATCGA
CCCAATGCTGGATGGTCGATCGACTTCATGTCCGATGCGTTATGGGACGGTCGGCGTTTTCGCACGTTCAATGTCATCGA
CGATTTCAGTCGGGAAGCCTTGGCGATCGAAGTGGACCTGAATCTTCCGGCCGCCCGCGTCATTCGCACGTTGGAACGCA
TCGCAGCTTGGCGCGGCTATCCGAACAAGCTGCGTTTGGACAACGGGCCGGAATTTGTCGCGCTGGCCTTGTCCGAGTGG
GCCGAGCGTAAGGGCATCGCCTTGGACTTCATTGAACCGGGGCGTCCGATGCAGAACGGTTTTATCGAACGCTTCAACGG
CAGCTACAGGCGCGGCGTGCTGGACATGCATCTCTTCCGCACGCTGAGCGAGGTCCGCGAACAGACCGAACACTGGCTTG
CCGACTACAACCAACAGATCCCGCACGACAGCCTGGGCGGACTAACGCCCGCTGAGTTCCGTGATCAACATCAACCGCAG
ACCTCTAGTTTTAGCTGGCATTGA

Protein sequence :
MRYQRRPDRDDEVIALLSELAERFPERGFGKLFQIIRRRGHVWNHKRVWRVYCLMKLNQRRRSRRRVPTRHPQPLACGDR
PNAGWSIDFMSDALWDGRRFRTFNVIDDFSREALAIEVDLNLPAARVIRTLERIAAWRGYPNKLRLDNGPEFVALALSEW
AERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHLFRTLSEVREQTEHWLADYNQQIPHDSLGGLTPAEFRDQHQPQ
TSSFSWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-68 62
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 3e-34 45
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 6e-38 43