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Name : CHY_0092 (CHY_0092) Accession : YP_358964.1 Strain : Carboxydothermus hydrogenoformans Z-2901 Genome accession: NC_007503 Putative virulence/resistance : Virulence Product : DNA-binding response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 79413 - 80117 bp Length : 705 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : ATGAAAAAGGTGCTTATTATCGAAGATGACCGGAGTATTGCGGAACTTGAGCGAGATTATTTGGAAGTGGCGGGGTTTTT GGTGGAGATTGCAGTTAATGGTGATCAGGGCTTAAAAAAAGCTTTAGAAGAAGAGTATGATTTAATCTTACTGGATTTAA TGCTTCCGGGAATTGATGGCTTTGAGGTGCTGCGCAAAGTGCGGGCAGAAAAAGATACACCGGTGCTTTTAGTGTCAGCC CGGCGGGAAGATATCGATAAGATCCGGGGGTTGGGACTGGGAGCGGATGATTATATCACAAAGCCTTTTAGTCCCAGTGA ACTGGTAGCCCGGGTAAAGGCTCATATAGGCCGTTACGAGCGGTTAACCGGCGGGCGAAAAAATCAAGACCTTTTGGAAT TTCCGGGTTTAGTGATTGATACCGCTGCCCGCCGGGTTTTTGCAGGAGATAAAGAAGTAAATTTAACCGGGAAAGAATTT GATTTACTTTTATTTTTAGCTAAAAACCCCAACAGGGTATTTACCAAAGAAGAACTTTTTGAGCGGATTTGGGGTATGGA CTCCCTGGGCGATTTATCTACAGTTACTGTGCATATTCGAAAACTTCGGGAAAAAATCGAAAAAGATCCCTCTAACCCCC AGTATATTGAAACCATCTGGGGTGTAGGCTACCGGTTTAGTGGTCTGTGGCCAATTAGAGATTAG Protein sequence : MKKVLIIEDDRSIAELERDYLEVAGFLVEIAVNGDQGLKKALEEEYDLILLDLMLPGIDGFEVLRKVRAEKDTPVLLVSA RREDIDKIRGLGLGADDYITKPFSPSELVARVKAHIGRYERLTGGRKNQDLLEFPGLVIDTAARRVFAGDKEVNLTGKEF DLLLFLAKNPNRVFTKEELFERIWGMDSLGDLSTVTVHIRKLREKIEKDPSNPQYIETIWGVGYRFSGLWPIRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 7e-32 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_012469.1.7686381. | Protein | 2e-35 | 45 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | AE016830.1.gene1681. | Protein | 3e-35 | 45 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | HE999704.1.gene2815. | Protein | 2e-34 | 44 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | AF155139.2.orf0.gene | Protein | 5e-42 | 44 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_012469.1.7685629. | Protein | 6e-34 | 43 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | FJ349556.1.orf0.gene | Protein | 7e-40 | 43 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | AM180355.1.gene1830. | Protein | 7e-39 | 43 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | DQ212986.1.gene4.p01 | Protein | 1e-35 | 42 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | AF162694.1.orf4.gene | Protein | 2e-38 | 42 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | EU250284.1.orf4.gene | Protein | 1e-39 | 42 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_007793.3914065.p0 | Protein | 4e-29 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_002758.1121390.p0 | Protein | 4e-29 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_010079.5776364.p0 | Protein | 4e-29 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_002952.2859858.p0 | Protein | 4e-29 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_007622.3794948.p0 | Protein | 4e-29 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_003923.1003417.p0 | Protein | 4e-29 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_013450.8614146.p0 | Protein | 4e-29 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_002951.3238224.p0 | Protein | 4e-29 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | AE015929.1.gene1106. | Protein | 1e-25 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | HE999704.1.gene1528. | Protein | 2e-27 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | CP000675.2.gene1535. | Protein | 9e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | AF130997.1.orf0.gene | Protein | 2e-33 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_002952.2859905.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_002758.1121668.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_009641.5332272.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_013450.8614421.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_007793.3914279.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_003923.1003749.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_002745.1124361.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_009782.5559369.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_002951.3237708.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | NC_007622.3794472.p0 | Protein | 4e-35 | 41 |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | AE000516.2.gene3505. | Protein | 6e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CHY_0092 | YP_358964.1 | DNA-binding response regulator | VFG1563 | Protein | 4e-32 | 41 |
