Gene Information

Name : CHY_0036 (CHY_0036)
Accession : YP_358908.1
Strain : Carboxydothermus hydrogenoformans Z-2901
Genome accession: NC_007503
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 28661 - 29092 bp
Length : 432 bp
Strand : +
Note : identified by similarity to SP:P37455; match to protein family HMM PF00436; match to protein family HMM PF01336; match to protein family HMM TIGR00621

DNA sequence :
ATGTTTAATAAAGTTATTTTAATAGGGAGGCTGACCCGGGACCCGGAGCTTAGACATACACCCCAGGGAACGCCGGTAGC
ATCGATCACCGTTGCGGTAGACCGTCCTTTTACCACCAAAGAAGGGCAACGGGAAACCGACTTTATTGATGTGGTGGTTT
GGCAGAAACTTGCCGAAACCGTCGCCCGCGTCTTAACCAAAGGACGGCTTGTTATGGTGGAAGGAAGACTGCAAATTAGA
AGCTATACCGATAAAGAAGGCCAGAAACGGCGGGTTTATGAAGTAGTGGGGGAAAACGTGAGGTTTTTAGATAAACCCAA
GAATGCTGGATTGGCTCCTGGCAACTTACCTGACGAGTTTCCTGCGGTGGACTTTGACCCGTCGGATTTTGGTACGGAAA
TCGAGATTAGCGATGAAGATATCCCATTTTAA

Protein sequence :
MFNKVILIGRLTRDPELRHTPQGTPVASITVAVDRPFTTKEGQRETDFIDVVVWQKLAETVARVLTKGRLVMVEGRLQIR
SYTDKEGQKRRVYEVVGENVRFLDKPKNAGLAPGNLPDEFPAVDFDPSDFGTEIEISDEDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 7e-26 57
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-26 56
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-26 55
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-26 55
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-26 55
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-26 55
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 3e-26 55
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-25 54
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-25 54
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 4e-24 52
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-25 46
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 1e-20 46
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 3e-15 44
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 2e-15 44