Gene Information

Name : CHY_2703 (CHY_2703)
Accession : YP_361485.1
Strain : Carboxydothermus hydrogenoformans Z-2901
Genome accession: NC_007503
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2391628 - 2392512 bp
Length : 885 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGGTGAAAAAGGAACATGGGTGGTTAAAAAGGGCCTTGCGGAAATGTTAAAAGGCGGCGTCATAATGGATGTCACCAC
TCCCGAACAGGCTAAAATTGCCGAAGAAGCCGGGGCCTGTGCGGTTATGGCTTTAGAAAGGGTACCGGCGGATATCCGGG
CGGCGGGAGGAGTTGCTCGGATGGCTGATCCTAACGTGATTTTGCGAATCATGGATGCAGTAACCATACCGGTAATGGCC
AAAGTTCGGATAGGACATTTTGTCGAAGCGCAGATTTTGGAAGCTCTCGGGGTTGATTACATTGACGAAAGTGAGGTTTT
AACTCCTGCCGATGAACTTTTCCATATCGATAAGCATGCCTTTAAAGTGCCTTTTGTTTGCGGAGCCCGGAACTTAGGTG
AAGCTTTGCGGCGGATTGGCGAAGGGGCTGCGATGATCAGGACCAAAGGTGAACCGGGAACGGGCAACGTAGTGGAGGCG
GTTCGCCATATGCGGCAGGTAATGGGAGAAATCCGGCGGATTCAGAACATGCCCAGGGAAGAGCTAATGACTGCTGCCAA
AGAAATGGGCGCTCCGTATGATTTAGTGTTATACGTCCATGAACACGGTCGGCTACCGGTGGTAAATTTTGCTGCCGGCG
GTATTGCAACTCCTGCCGATGCGGCATTAATGATGCAGCTTGGTGCTGACGGTATTTTTGTGGGTTCGGGAATTTTTAAA
TCCAAAGATCCGGTGGGCAGAGCAAAAGCCATCGTAGCTGCTACTACTTATTATGACGACCCCAAAGTATTGGCTGAAGT
TTCTAAAGGTTTAGGGGAAGCTATGCCCGGTATTGATATTAAGACCATTTCCCAAACCGAAAGAATGAGCGAGCGAGGCT
GGTAA

Protein sequence :
MGEKGTWVVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPNVILRIMDAVTIPVMA
KVRIGHFVEAQILEALGVDYIDESEVLTPADELFHIDKHAFKVPFVCGARNLGEALRRIGEGAAMIRTKGEPGTGNVVEA
VRHMRQVMGEIRRIQNMPREELMTAAKEMGAPYDLVLYVHEHGRLPVVNFAAGGIATPADAALMMQLGADGIFVGSGIFK
SKDPVGRAKAIVAATTYYDDPKVLAEVSKGLGEAMPGIDIKTISQTERMSERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-88 71
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-87 71
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-88 70