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Name : CHY_2348 (CHY_2348) Accession : YP_361153.1 Strain : Carboxydothermus hydrogenoformans Z-2901 Genome accession: NC_007503 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence clpC/mecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2103669 - 2106104 bp Length : 2436 bp Strand : - Note : identified by similarity to SP:P37571; match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGTTTGACAAGTTTACCCAAAGAGCCCAAAAAGTTATTAGAATGGCTCAGGAAGAAGCAAGAAAAATGAATTATCCTTA TGTAGCTACGGAACATCTGCTTTTGGGAATTATAAATGAAGGAGAAAGTGTTGCGGCAAAAGTTTTAGAAAACCTTGGTA TTGATGGCCAGAAAGTTCGGGAAAAAATTTTAGAACTGGTTGGCCCCGGGGAAGGGCCGATGCCGGCGGAGATTGCTTTT ACCCCAAGGGCAAAAAGAGTTTTGGAACTATCGGTAGATGAGGCGGCCCGGTTTGGCCATAACTATGTTGGTACTGAACA TTTGCTTTTGGGTTTAATCCGGGAAGGAGAAGGGGTGGCCGCCAGAGTTTTGGTAAGCCTCGGTGCTGATTTGGAAAGGG TACGGGCTGAAATTACCCAGGTGCTAAGTGGTGGCCCAATTCCCGGAACCTCCGGCCAGGCCGGTGGACAAGCAAAGAAG AAAGCTGTTAGAACTCCCACCCTTGATGAGCATGGCCGGGATTTAACGGCTTTAGCCCGGGAAAATAAATTAGACCCGGT GGTAGGCCGGGAGAAGGAAATTGAAAGGGTAATTCAAGTTTTATCCCGCAGAACCAAAAACAATCCGGTTTTAATTGGGG AGCCGGGAGTAGGTAAGACGGCAATTGTGGAGGGGCTTGCCCAGAGAATTGTGCAAAAGAAAGTTCCCGAGATTTTAATT GATAAACGGGTTGTGACCCTCGATTTAGCATCAATGGTTGCCGGAACTAAATATCGGGGAGAATTTGAGGAAAGGCTTAA AAAGGTCTTAGAAGAAATTAAAAATGCTGGAAACGTTATCGTATTTATTGATGAAATCCATACCTTAATTGGGGCAGGGG CTGCCGAAGGGGCGATTGATGCTGCCAATATCTTAAAACCGAGCCTTGCCCGGGGTGAAATTCAGTGTGTAGGTGCGACC ACTTTAGATGAATATCGGAAATATATAGAAAAGGACCCGGCTTTAGAACGGCGGTTCCAGCCAATAATGGTAGATGAACC AACGGTTGAAGAAACAGTTGAAATCTTAAAAGGCTTAAGGGACCGGTACGAAGCTCACCACCGGGTAAAAATTACCGATG AAGCCATTATTGCCGCTGCAAAGCTTTCGGATCGGTATATTACCGATCGCTTCCTACCGGATAAGGCTATTGACTTGATT GATGAAGCGGCATCAAGAGTTCGTTTAAATGCCTTTACTGCACCGCCCAATTTAAAAGAGTTAGAAGAAAAAATTAACGA AATCCGCAAGGAAAAGGAAGCGGCGGTAGCTGCTCAGGAGTTTGAAAAAGCAGCCAAATTAAGAGACCAGGAGCAAAAGC TTAAAGCAGAGCTTGAGGAAAAGAAGAAAGAGTGGGAAAAAGAGCAAAGCGACCATTTATTATCGGTTACCGAAGACGAT ATTGCCCAGATTGTTTCGCAGTGGACCGGTATTCCGGTCAAAAAACTTGCCGAAGAAGAATCGGAACGATTACTTAAGCT TGAGGAAATTTTGCACCAGCGGGTAATAGGCCAGGATGAAGCAGTAAAAGCTGTAGCCCGGGCAGTGAGAAGAGCACGGG CGGGTCTTAAAGATCCCAAGCGACCCATCGGATCGTTTATTTTCTTAGGTCCGACGGGTGTTGGGAAAACTGAGCTGGCA CGGGCATTAGCCGAAGCTTTATTTGGAGATGAAGATGCGTTAATTCGGATAGATATGTCAGAGTATATGGAAAAACACAC GGTAGCTCGCCTAATCGGTGCACCGCCGGGCTATGTTGGTTATGAAGAAGGAGGGCAGCTCACCGAAGCGGTAAGGCGGA AGCCTTATTCGGTGATCTTACTTGACGAAATTGAGAAAGCTCACCCCGAGGTCTTTAACATCTTGTTGCAGGTATTAGAA GATGGGCGACTTACCGACTCTAAAGGGCGTACGGTAGACTTTAAAAATACCGTAATAATCATGACCTCCAACATCGGAGC ACATCTAATAAAGAAAGAAGCCCGTTTAGGCTTTAAAAATGTAGCCGACGAGAAAAAAGAAGAGGATATCAAGGAGAAGT TAATGGCGGAACTCAAGCGTACTTTCCGGCCGGAATTTTTAAACCGGATTGATGAGATTATTGTCTTCCATTCGTTAACA GAAGAACACTTAAAGCAAATAGTCCGGTTGATGCTAAAAGAAGTAGGCAAACGTTTGGAAGAACAGGAGATGAAGGTAGA ATTTGACGACTCCTTAATTGAAGTAATACTTAAAGAAGGTTATGATGAAGCTTTTGGTGCTCGACCGCTGCGGCGGGCTA TTCAAAAGATAGTAGAAGATAAGTTGTCGGAAGAGCTTCTTTTGGGAAACATCAAAAAAGGAGATACGGTAAAACTGTAT GCGGAAGATGGGCAAATCAAGGTAGCAAAAATTTAA Protein sequence : MFDKFTQRAQKVIRMAQEEARKMNYPYVATEHLLLGIINEGESVAAKVLENLGIDGQKVREKILELVGPGEGPMPAEIAF TPRAKRVLELSVDEAARFGHNYVGTEHLLLGLIREGEGVAARVLVSLGADLERVRAEITQVLSGGPIPGTSGQAGGQAKK KAVRTPTLDEHGRDLTALARENKLDPVVGREKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVQKKVPEILI DKRVVTLDLASMVAGTKYRGEFEERLKKVLEEIKNAGNVIVFIDEIHTLIGAGAAEGAIDAANILKPSLARGEIQCVGAT TLDEYRKYIEKDPALERRFQPIMVDEPTVEETVEILKGLRDRYEAHHRVKITDEAIIAAAKLSDRYITDRFLPDKAIDLI DEAASRVRLNAFTAPPNLKELEEKINEIRKEKEAAVAAQEFEKAAKLRDQEQKLKAELEEKKKEWEKEQSDHLLSVTEDD IAQIVSQWTGIPVKKLAEEESERLLKLEEILHQRVIGQDEAVKAVARAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELA RALAEALFGDEDALIRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQVLE DGRLTDSKGRTVDFKNTVIIMTSNIGAHLIKKEARLGFKNVADEKKEEDIKEKLMAELKRTFRPEFLNRIDEIIVFHSLT EEHLKQIVRLMLKEVGKRLEEQEMKVEFDDSLIEVILKEGYDEAFGARPLRRAIQKIVEDKLSEELLLGNIKKGDTVKLY AEDGQIKVAKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CHY_2348 | YP_361153.1 | negative regulator of genetic competence clpC/mecB | VFG0079 | Protein | 0.0 | 67 |
