Gene Information

Name : argH (CHY_2259)
Accession : YP_361068.1
Strain : Carboxydothermus hydrogenoformans Z-2901
Genome accession: NC_007503
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : 4.3.2.1
Position : 2038399 - 2039769 bp
Length : 1371 bp
Strand : -
Note : identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838

DNA sequence :
ATGAAGCTCTGGGGTGGACGCTTTGAAAAGGATACCGACCGGGAAATGCGGGATTTTCATGCCTCAATCCACTTTGACTG
GCGGCTTTACGAAGAAGATATCAGGGGGAGCATTGCCCATGTGACGATGCTGGCCCGGCAGGGTATAATCACCAATGAGG
AAAAAGAGAAAATTATTGGGGCACTTACAGAAATTTTAGAGGAGATAAAAGCCGGTAAGGTGGATTTTTCCCCTGAAGCC
GAAGACATTCACCTGAATATTGAAACGCTATTAATTAAGAAAATCGGGGACGTGGGGAAAAAAGTTCACACCGGTCGTAG
CCGTAACGACCAGGTGGCTTTAGACACCCGGCTTTATGTAAAGAAAGAAGGTACGGCTATTATTGCTCTTATAAAAGAGC
TCCAGGAAACTTTAATTAATCTGGCCGAAGGGCATTTAAACACTATCATGCCCGGTTATACTCACCTGCAGCGGGCGCAG
CCGGTGACCCTGGCCCATCATCTTTTGGCATATTTCTGGATGTTTGACCGGGACCGAAGCCGTTTTTACGATTGTTTAAA
ACGGGCTGATAGGTCGCCGCTGGGAGCCGGAGCACTGGCCGGTACCACCTTACCTTTAGACCGGGAGTTTGTTTCCGAAC
TTTTAGGTTTTAATGGTGTCTGTGAAAATAGTCTTGATGCGGTATCGGACCGGGACTATATCTTAGAATTTCTCTTTGCG
GCGGCCACTACGATGATGCATTTAAGCCGCTTTTCCGAAGAAATTGTTCTTTGGAATAGCAAAGAATTTTCCTTTGTGGA
AATTGATGACCGGTATGCTACCGGCTCTTCCATGATGCCCCAAAAGAAAAATCCCGATGCTGCCGAACTTATCCGGGGTA
AAACCGGCAGGGTATACGGCAATCTAATGGCGGTATTAACGATGATGAAAGGTTTGCCCTTAGCTTATAACAAGGATATG
CAGGAAGATAAGGAGCCGCTTTTTGATACCGTCGATACCTTAAAGGGAAGTTTAAGGGTTTTTACTGGAATGCTGAAAAC
AATTAAATTTAACCAGGGGGCTATGTATAAGGCGGCTTTAAAAGGATTTCTTAATGCTACCGACTTGGCCGAATACCTGG
TGGAAAAAGGAGTTCCTTTTAGAGAAGCTCACAGGATTACTGGAGAACTGGTGTTAAAAGCCGAAAAAACTGGAAGGGAA
CTGTTGGAGCTTTCCTTGGATGAGCTTAAAGAGATGTCGCCATTAATCGAAGAGGATATTTACGAAAAGCTTAAAATTGA
AAATGTCTTAGCTAAAAGGAAGCTTTTCGGGGGGCCTGCCCCTCAGGCGGTAATTGAACAGTTAAGACAAGCCCGGGAAG
CATTAGCATAA

Protein sequence :
MKLWGGRFEKDTDREMRDFHASIHFDWRLYEEDIRGSIAHVTMLARQGIITNEEKEKIIGALTEILEEIKAGKVDFSPEA
EDIHLNIETLLIKKIGDVGKKVHTGRSRNDQVALDTRLYVKKEGTAIIALIKELQETLINLAEGHLNTIMPGYTHLQRAQ
PVTLAHHLLAYFWMFDRDRSRFYDCLKRADRSPLGAGALAGTTLPLDREFVSELLGFNGVCENSLDAVSDRDYILEFLFA
AATTMMHLSRFSEEIVLWNSKEFSFVEIDDRYATGSSMMPQKKNPDAAELIRGKTGRVYGNLMAVLTMMKGLPLAYNKDM
QEDKEPLFDTVDTLKGSLRVFTGMLKTIKFNQGAMYKAALKGFLNATDLAEYLVEKGVPFREAHRITGELVLKAEKTGRE
LLELSLDELKEMSPLIEEDIYEKLKIENVLAKRKLFGGPAPQAVIEQLRQAREALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 5e-114 55
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 5e-114 55