Gene Information

Name : CHY_2240 (CHY_2240)
Accession : YP_361049.1
Strain : Carboxydothermus hydrogenoformans Z-2901
Genome accession: NC_007503
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2026688 - 2027386 bp
Length : 699 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGATTCGGGTCGAAAACTTAACCAAAGGCTATCTTCTCGGTAAAAATCGGGTAGAAGTTTTAAAAAACATTAACTTTAC
CGTAAGCGCAGGCGAGTTTGTGGCCATCATGGGACCGTCGGGTTCGGGTAAATCTACCTTAATGAATATTCTGGGGTGCT
TGGACCGTCCGGATAGCGGAAAATACTATTTAGACGGGGTAGATGTAGGAAGTCTATCCGATAATGAGCTGGCGGAAATC
CGAAACCGAAAAATTGGCTTTGTGTTTCAAAACTTTTATCTTCTGCCGCGGGAAAACGTCTTAAAAAATGTCGAACTACC
TCTTCTCTATCAAGGAGTAAAACCTGGAATAAGGAAAGAAAAAGCAATTGAAGCTCTAAGAAAGGTTGGACTTTCCCATC
GTTTAGAGCATAAGCCCAATGAAATCTCCGGCGGTGAGCGTCAAAGGGTGGCCATTGCCCGGGCGTTAGTTACCAATCCT
TTATTAATTTTAGCCGATGAACCAACGGGAAACTTAGATACTAAATCCAGTACGGAAATTATGAATATTTTAACCGGCTT
AAACCAGGAAGGGGTAACAATTATTTTGGTCACCCACGAACCGGATGTGGCTTCCTTTGCTAAAAGGTTAATTAGAATTC
GTGATGGCGAAATTGTCGAAGACCGGGCAATAGAGAGGGGGCAAGGCGTTGGAGCTTAA

Protein sequence :
MIRVENLTKGYLLGKNRVEVLKNINFTVSAGEFVAIMGPSGSGKSTLMNILGCLDRPDSGKYYLDGVDVGSLSDNELAEI
RNRKIGFVFQNFYLLPRENVLKNVELPLLYQGVKPGIRKEKAIEALRKVGLSHRLEHKPNEISGGERQRVAIARALVTNP
LLILADEPTGNLDTKSSTEIMNILTGLNQEGVTIILVTHEPDVASFAKRLIRIRDGEIVEDRAIERGQGVGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-33 46
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-31 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CHY_2240 YP_361049.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-61 59
CHY_2240 YP_361049.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-47 48
CHY_2240 YP_361049.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-39 47
CHY_2240 YP_361049.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-36 41
CHY_2240 YP_361049.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-25 41