Gene Information

Name : CHY_2095 (CHY_2095)
Accession : YP_360914.1
Strain : Carboxydothermus hydrogenoformans Z-2901
Genome accession: NC_007503
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1878896 - 1879585 bp
Length : 690 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGCCTACATTCAAGTGGAAAGCATTAGCAAGAAGTATGTTAAAGGCAATGTGGAGACCAGAGTATTGAAAGATGTGAG
CTTTCAAGTGGGTAAAGGAGAGTTCTGGATTATAGCGGGTCCTTCGGGCTCCGGAAAATCAACCTTATTAAGTATCCTTG
GAAGCTTGAATGAGCCGGATAGTGGTAGGGTGCTGGTAGATGATTTGGATCTCTTTAGCTTAAGTCACGATGAACGGGCA
CTTTTTCGCTTAAATTATCTTGGCTTTATCTTTCAAAATTTTCATCTTTTACCTTACTTAACTGCTGTAGAAAATGTTCT
GTTACCTACCCTTGCTTATCCCCGGAAAATCAGTAAGGAAAAAGAGGCGCGGGAGCTTTTAAAAATGCTTGGGCTTGAGG
GAAAAGAAGAAAAATATCCCAAAGAGCTTTCCGGAGGAGAACAGGAGCGGGTAGCTATAGCCCGGGCACTTATCATGGAG
CCGGAAATATTGTTAGCCGATGAACCAACGGGTAACTTGGATAGCAAGACCGGAGAGGAAGTTATGAAGATTTTTGCCGA
ATTAAATCGCCGGGGTAAGACGATTATCATGGTAACTCATAACCTTGACCATCTTCATTATGCTACACATGCTTTATTTT
TAAAAGATGGTGAGGTTTTGGAAACAAAAACTTTAAAGGAGGCGAATTAA

Protein sequence :
MAYIQVESISKKYVKGNVETRVLKDVSFQVGKGEFWIIAGPSGSGKSTLLSILGSLNEPDSGRVLVDDLDLFSLSHDERA
LFRLNYLGFIFQNFHLLPYLTAVENVLLPTLAYPRKISKEKEARELLKMLGLEGKEEKYPKELSGGEQERVAIARALIME
PEILLADEPTGNLDSKTGEEVMKIFAELNRRGKTIIMVTHNLDHLHYATHALFLKDGEVLETKTLKEAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-20 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CHY_2095 YP_360914.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-32 47
CHY_2095 YP_360914.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-30 46
CHY_2095 YP_360914.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-33 43
CHY_2095 YP_360914.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-28 41