|
Name : hslU (CHY_1790) Accession : YP_360610.1 Strain : Carboxydothermus hydrogenoformans Z-2901 Genome accession: NC_007503 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 1601123 - 1602508 bp Length : 1386 bp Strand : - Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : TTGGAAAATTTAACTCCCCGGCAAATAGTTGAGTATTTGGATAAATATATAATAGGGCAGGAAGCGGCCAAAAAAGCGGT GGCGGTAGCCTTAAGAAACAGGTATCGAAGAAAGCTTTTGCCTCCCCACTTAAAGGATGAAATAATACCCAAAAATATTT TAATGATCGGGCCTACCGGTGTGGGTAAAACCGAAATAGCCCGGAGACTGGCGAAATTAATTAAAGCTCCTTTCGTAAAG GTTGAGGCCACAAAATTTACCGAAGTCGGTTATGTTGGCCGGGATGTAGAAGGGATGATTCGGGATTTGGTGGAGACTTC CCTCAGGATGGTGCGGGAAGAAAAGATTAAAATGGTGGAGGATAAAGCTTATAATTTAGCGGTAGAAAGGCTATCCGAAA TTATGATTCCCAATCCCAAGAAGGAAAATATCAAAAACCCTTTTGAAATGTTTTTTGGCGGGATCCGGGAGGATGCAGCC AAAACGGACCCTGCTTATGATGAATTAAATTATCGCCGGCGGGAACTTCAGGATAAAATAAAGAAGGGTTTTTTGGATAA TGAAATGGTAGAAATTGAGGTTGAAGAGCAAAAAACTCCCATGGTAGAGGTTTTTGGCGTCGGTGGCATTGAAGAAATGG GGCTAAACTTTCAGGATATTTTGGGTGGCCTGATTCCTCCTCGACGGAAAAAACGGCGGGTTACGGTAAAAGAAGCGCTG AAAATTTTAACGCAACAGGAAGCCCAGAAATTAATTGATATGGATGAGGTGCAACGGGAAGCCATCAAAAGAGCAGAGGA AGACGGCATCGTCTTTTTGGATGAAATCGACAAGATCGCTTCCACCGGCAATACCCATGGGCCCGATGTTTCCCGGGGAG GAGTGCAGCGGGATATCCTGCCCATTGTGGAAGGATCAACGGTTTTAACCAAATACGGACCGGTGAAAACCGATCATATT TTATTTATTGCGGCCGGTGCCTTTCATATGAGTAAGCCTTCGGATTTAATACCGGAACTGCAGGGGCGTTTTCCCATTCG GGTGGAATTAAAGAGTTTAACCGTGGAGGATTTTAAAAAAATCCTTACCGTTCCGGAAAATGCCCTTACCAAGCAGTATG TTGAGCTGCTAGCGACCGAAGGGGTTAATTTGAAATTTACTGAAGATTCCCTTGAAGAAATTGCAAAAATGGCTTATACT GTTAACGAACGGAATGAAAATATTGGTGCAAGGCGACTTATCACGATTTTAGAAAAAGTTCTGGAAGATTTATCGTTTAA CGCTCCGGAGATGTGGGGGCAAACGGTGGTAATTGACCGTAAGTTTGTCCAGGATAAGTTAAGTGAAATAGTTCACGATT CCGATTTATCAAGGTATATCTTATAA Protein sequence : MENLTPRQIVEYLDKYIIGQEAAKKAVAVALRNRYRRKLLPPHLKDEIIPKNILMIGPTGVGKTEIARRLAKLIKAPFVK VEATKFTEVGYVGRDVEGMIRDLVETSLRMVREEKIKMVEDKAYNLAVERLSEIMIPNPKKENIKNPFEMFFGGIREDAA KTDPAYDELNYRRRELQDKIKKGFLDNEMVEIEVEEQKTPMVEVFGVGGIEEMGLNFQDILGGLIPPRRKKRRVTVKEAL KILTQQEAQKLIDMDEVQREAIKRAEEDGIVFLDEIDKIASTGNTHGPDVSRGGVQRDILPIVEGSTVLTKYGPVKTDHI LFIAAGAFHMSKPSDLIPELQGRFPIRVELKSLTVEDFKKILTVPENALTKQYVELLATEGVNLKFTEDSLEEIAKMAYT VNERNENIGARRLITILEKVLEDLSFNAPEMWGQTVVIDRKFVQDKLSEIVHDSDLSRYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 1e-94 | 49 |
