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Name : polA (CHY_1650) Accession : YP_360471.1 Strain : Carboxydothermus hydrogenoformans Z-2901 Genome accession: NC_007503 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 1480397 - 1482892 bp Length : 2496 bp Strand : - Note : identified by similarity to SP:P52026; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 DNA sequence : ATGGGAAAAGTAGTCCTGGTGGATGGAAATAGTTTATTACATAGAGCGTTTTTTGCCCTTCCGCCCTTAAAAACTACTAA AGGAGAGCCTACCGGGGCGGTTTACGGGTTTTTAACGATGCTTTTTCGGGTAATAAAAGATGAAAAACCCGAATATTTAG CGGTAGCTTTTGATATTAGCCGGAAAACTTTTCGTACCGAGCAGTTTACTGCATACAAAGGGCACCGCAAAGAAGCCCCG GATGAGCTTGTACCCCAGTTTGCCCTGGTGCGGGAAGTATTAAAGGTTTTAAATGTTCCCTATATTGAACTTGACGGTTA TGAGGCCGATGATATTATCGGCCACCTATCAAGGGCTTTTGCGGGACAAGGACATGAAGTGGTGATTTATACCGCTGACC GGGACATGCTGCAATTGGTAGATGAAAAAACGGTGGTATACCTTACCAAAAAAGGCATTACCGAACTGGTTAAAATGGAT TTAGCTGCGATTTTAGAAAACTACGGCTTAAAGCCTAAACAGCTTGTGGATGTTAAAGGATTAATGGGAGATCCCTCGGA CAACATACCCGGGGTTCCCGGGATTGGGGAGAAAACTGCTTTAGATTTAATTAAAACTTATGGCTCAGTGGAAGAAGTTT TGGCCCATAAAGATGAGTTAAAACCTAAATTAAGAGAAAAGCTTGCCGAACACGAAAATTTAGCAAAAATATCGAAACAA TTAGCTACAATCCTGCGGGAAATACCGTTAGAAATCTCCCTGGAAGATTTAAAAGTTAAAGAACCTAATTATGAAGAAGT TGCTAAATTATTTCTTCGCCTTGAGTTTAAAAGCTTTTTAAAAGAAATAGAACCAAAAATAAAGAAAGAATACCAGGAAG GTAAAGATTTGGTGCAAGTTGAAACTGTAGAAACGGAAGGACAGATTGCAGTAGTTTTTAGTGATGGATTTTATGTTGAT GACGGGGAAAAAACAAAGTTTTACTCTTTAGACCGGCTGAATGAAATAGAGGAAATATTTAGGAATAAAAAAATTATTAC CGACGATGCCAAAGGAATTTATCATGTCTGTTTAGAAAAAGGTCTGACTTTTCCCGAAGTTTGTTTTGATGCGCGGATTG CAGCTTATGTTTTAAACCCGGCCGACCAAAATCCCGGCCTCAAGGGGCTTTATCTAAAGTATGACTTACCGGTGTATGAA GATGTATCTTTAAACATTAGAGGGTTGTTTTATTTAAAAAAAGAAATGATGAAAAAAATCTTTGAGCAGGAGCAAGAAAG GTTATTTTATGAAATAGAACTTCCTTTAACTCCAGTTCTTGCTCAAATGGAGCATACCGGCATTCAGGTTGACCGGGAAG CTTTAAAAGAGATGTCGTTAGAGCTGGGAGAGCAAATTGAAGAGTTAATCCGGGAAATTTATGTGCTGGCGGGGGAAGAG TTTAACTTAAACTCGCCCAGGCAGCTGGGAGTTATTCTTTTTGAAAAACTTGGGCTGCCGGTAATTAAAAAGACCAAAAC GGGCTACTCTACCGATGCGGAGGTTTTGGAAGAGCTCTTGCCTTTCCACGAAATTATCGGCAAAATATTGAATTACCGGC AGCTTATGAAGTTAAAATCCACTTATACTGACGGCTTAATGCCTTTAATAAATGAGCGTACCGGTAAACTTCACACTACT TTTAACCAGACCGGTACTTTAACCGGACGCCTGGCGTCTTCGGAGCCCAATCTCCAAAATATTCCCATCCGGTTGGAACT CGGTCGGAAATTACGCAAGATGTTTATACCTTCACCGGGGTATGATTATATTGTTTCGGCGGATTATTCCCAGATTGAAT TAAGGCTTCTTGCCCATTTTTCCGAAGAGCCCAAGCTTATTGAAGCTTACCAAAAAGGGGAGGATATTCACCGGAAAACG GCCTCCGAGGTGTTCGGTGTATCTTTGGAAGAAGTTACTCCCGAGATGCGCGCTCATGCCAAGTCGGTGAACTTCGGCAT TGTTTATGGCATTAGTGATTTTGGTTTAGGCAGAGACTTAAAGATTCCCCGGGAGGTTGCCGGTAAGTACATTAAAAATT ATTTTGCCAACTATCCCAAAGTGCGGGAGTATCTCGATGAACTTGTCCGTACGGCAAGAGAAAAGGGATATGTGACCACT TTATTTGGGCGAAGACGCTATATTCCTGAGCTATCTTCAAAAAACCGCACGGTTCAGGGTTTTGGCGAAAGGACGGCCAT GAATACTCCCCTTCAGGGCTCGGCTGCCGATATTATTAAGCTTGCAATGATTAATGTAGAAAAAGAACTTAAAGCCCGTA AGCTTAAGTCCCGGCTCCTTCTTTCGGTGCACGATGAGTTAGTTTTAGAAGTGCCGGCGGAAGAGCTGGAAGAGGTAAAA GCGCTGGTAAAAGGGGTTATGGAGTCGGTGGTTGAACTGAAAGTGCCTTTAATCGCTGAAGTTGGTGCAGGCAAAAACTG GTATGAAGCGAAGTAA Protein sequence : MGKVVLVDGNSLLHRAFFALPPLKTTKGEPTGAVYGFLTMLFRVIKDEKPEYLAVAFDISRKTFRTEQFTAYKGHRKEAP DELVPQFALVREVLKVLNVPYIELDGYEADDIIGHLSRAFAGQGHEVVIYTADRDMLQLVDEKTVVYLTKKGITELVKMD LAAILENYGLKPKQLVDVKGLMGDPSDNIPGVPGIGEKTALDLIKTYGSVEEVLAHKDELKPKLREKLAEHENLAKISKQ LATILREIPLEISLEDLKVKEPNYEEVAKLFLRLEFKSFLKEIEPKIKKEYQEGKDLVQVETVETEGQIAVVFSDGFYVD DGEKTKFYSLDRLNEIEEIFRNKKIITDDAKGIYHVCLEKGLTFPEVCFDARIAAYVLNPADQNPGLKGLYLKYDLPVYE DVSLNIRGLFYLKKEMMKKIFEQEQERLFYEIELPLTPVLAQMEHTGIQVDREALKEMSLELGEQIEELIREIYVLAGEE FNLNSPRQLGVILFEKLGLPVIKKTKTGYSTDAEVLEELLPFHEIIGKILNYRQLMKLKSTYTDGLMPLINERTGKLHTT FNQTGTLTGRLASSEPNLQNIPIRLELGRKLRKMFIPSPGYDYIVSADYSQIELRLLAHFSEEPKLIEAYQKGEDIHRKT ASEVFGVSLEEVTPEMRAHAKSVNFGIVYGISDFGLGRDLKIPREVAGKYIKNYFANYPKVREYLDELVRTAREKGYVTT LFGRRRYIPELSSKNRTVQGFGERTAMNTPLQGSAADIIKLAMINVEKELKARKLKSRLLLSVHDELVLEVPAEELEEVK ALVKGVMESVVELKVPLIAEVGAGKNWYEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 8e-143 | 43 |
