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Name : pdp (CHY_1554) Accession : YP_360386.1 Strain : Carboxydothermus hydrogenoformans Z-2901 Genome accession: NC_007503 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 1389524 - 1390852 bp Length : 1329 bp Strand : - Note : identified by similarity to SP:P39142; match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 DNA sequence : ATGAGAGCGTACGACATTATCTTGAAAAAACGGAACGGAGAAAAACTTTCTAAAGAGGAAATTTACTTTTTTGTCCATGG TTTTACCCGTGGTGAGATTCCTGACTACCAAATGGCAGCCTTCCTAATGGCAGTTTATTTTCAAGGAATGGATGATGAAG AAGTTGCCGATTTGACCATGGCAATGGTGGAGTCCGGGGATAAAGTAGATCTTTCAGCAATTTCCGGGATAAAGGTTGAC AAGCATAGTACCGGGGGTGTAGGTGATAAAACGACTTTAGTTTTAGCACCGCTTGTGGCTGCGGTGGGGGTTCCAGTTGC CAAAATGTCCGGACGCGGCTTGGGACACACCGGTGGAACTTTAGATAAGTTAGAATCCATTGCCGGTTTTAATGTAGCTT TATCCCCGGAAGAGTTTATAAAGCAGGTTAATGATATAGGTATAGCGGTTATAGGGCAGACGGCAAAACTTGCTCCAGCT GATGGCAAAATGTACGCTTTAAGAGATGTAACAGCTACGGTAGATAGTCTCCCGCTGATTGCTTCCAGCATCATGTCCAA GAAAATTGCTGGTGGCGCCGATGCCATAGTCTTAGATGTTAAAACCGGTAGCGGAGCTTTTATGAAGGATTTAGAAGGAA GCATTCAGTTGGCACAAGCCATGGTAAAGATCGGCGAGAGGGTTGGGAGAGAAACGATCGCTGTTATATCAGAAATGGGT GAACCTCTGGGGTTTGCCGTGGGTAATAGCCTGGAAGTGAAAGAGGCAATAGCGACCTTAAAGGGTGAAGGGCCGGAGGA TTTAACAGAACTTTGTCTTACCTTAGGCGGATATATGGTTTTTCTCGCCCGGAAGGCCGATACTTTTGAAACCGGTAAGG AAATGTTAAAAGAAGCTTTGCAATCGGGTAAGGCTTTTGCCAAGTTAAAAGAGTTTGTCAAAAGCCAGGGAGGTAATGTG CACCAAATTGACGACCCTGCGCTTTTACCAAAAGCACAAGCGATATCCCAAATTAAAGCGGAAAAAGAAGGCTTTGTCAT TGAGGTTGATGCGTTAAAGGTTGGTTTAGGTGCCATGTACTTAGGAGCTGGCAGGGCAAAGAAAGAAGACAAAATTGACC ACAGTGTTGGGATTGTTTTAAGGAAAAAAGTTGGAGATAAAGTGCTAAGAGGAGATGTCTTAGCCGAACTTCACTATAAT GATGAAAAGAAATTGGAAGATGCGCAAAAAATTGTATTTGCAGCTTTTAAAATTGATAGTAGGCCCCCTCAAAAGGCTCC ATTTATTAAAGCTGTGGTGACGTCTAAGGGAGTAGAGAAATATGTCTGA Protein sequence : MRAYDIILKKRNGEKLSKEEIYFFVHGFTRGEIPDYQMAAFLMAVYFQGMDDEEVADLTMAMVESGDKVDLSAISGIKVD KHSTGGVGDKTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTLDKLESIAGFNVALSPEEFIKQVNDIGIAVIGQTAKLAPA DGKMYALRDVTATVDSLPLIASSIMSKKIAGGADAIVLDVKTGSGAFMKDLEGSIQLAQAMVKIGERVGRETIAVISEMG EPLGFAVGNSLEVKEAIATLKGEGPEDLTELCLTLGGYMVFLARKADTFETGKEMLKEALQSGKAFAKLKEFVKSQGGNV HQIDDPALLPKAQAISQIKAEKEGFVIEVDALKVGLGAMYLGAGRAKKEDKIDHSVGIVLRKKVGDKVLRGDVLAELHYN DEKKLEDAQKIVFAAFKIDSRPPQKAPFIKAVVTSKGVEKYV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-76 | 44 |
