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Name : ribD (CHY_1475) Accession : YP_360307.1 Strain : Carboxydothermus hydrogenoformans Z-2901 Genome accession: NC_007503 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 1315671 - 1316756 bp Length : 1086 bp Strand : - Note : identified by similarity to SP:P17618; match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGAACGACCAGCAGTTAATGAAAAGGGCGTTAAAGCTTGCTAAAAGAGCTTTGGGAAGAACTTCGCCAAATCCTGTAGT GGGAGCTGTTATTGTTGATAAAGATGGAAATATTGTAGGGGAAGGATACCATAAAAAAGCTGGCTTACCCCATGCTGAAC GGGAAGCATTAAAAGTGGCCGGGGAAAAAGCCCGTGGCGGTACCATGTACGTAACTTTAGAGCCATGTTGTCACTATGGA CGAACACCACCTTGTACCGATGCGATAATTGCGGCAGGTATAAAAAAGGTGGTAGTTGCCGTACGGGACCCGAATCCCAA GGTTTCCGGAAAAGGTATTGAAATTTTACGAAATGCAGGAATTGAAGTTGTTGAAGGGGTTTTGGCGGAAGAGGCTTTTT ACCTTAATGAAAAATTTTTTAAGTTTATTAAAACGGGGCTACCTTTTATTTCTTTAAAATGGGCGATGACGGTTGATGGT AAAATTGCCACCGAAACTTATGACTCCCGTTGGGTTTCCGGTGAGAAAAGCCGGAGTTTTGTCCATAGGTTACGGAATGA ATATGATGCAGTTTTGGTGGGAGCAAAGACCTTAATTATAGATAATCCACTGTTAACTTGTCGGATACCTCAGGGGCGAA ATCCCTACCGCATAGTTTTATCTGGAAGTGGAAATTTACCGGAAGGTCTAAATATTTTTCAACTTGAAAAGGAGAAAAAT ATTTTAATTACCGCCAGTAAAAAACTACCAAAACATGTAAGCAACGGATTTGGTCACATTATAACTACTCCTTTAGGGGA AAATAGGATTAACATTAAAGAGGCTTTTTTGGAACTTTCCAGGCTTGGAATCATTTCAATTTTGGTTGAGGGCGGAGCAG TGGTCCATGCGAGTTTACTACAAAATAGACTTGCGGACAAAGCATATATCTTTATTGCACCCAAGATAGTTGGGGGGAAA AATGCTCCCGGACCAATTGGTGATTTAAAAATAAGTTTAATGAAAGATGCCTTGCCGTTAGCAATACACAAGTTAAGACG TTTTGGGGAAGATGTTTTTATTGAAGGCTATTTTTCAGGAGGGTAA Protein sequence : MNDQQLMKRALKLAKRALGRTSPNPVVGAVIVDKDGNIVGEGYHKKAGLPHAEREALKVAGEKARGGTMYVTLEPCCHYG RTPPCTDAIIAAGIKKVVVAVRDPNPKVSGKGIEILRNAGIEVVEGVLAEEAFYLNEKFFKFIKTGLPFISLKWAMTVDG KIATETYDSRWVSGEKSRSFVHRLRNEYDAVLVGAKTLIIDNPLLTCRIPQGRNPYRIVLSGSGNLPEGLNIFQLEKEKN ILITASKKLPKHVSNGFGHIITTPLGENRINIKEAFLELSRLGIISILVEGGAVVHASLLQNRLADKAYIFIAPKIVGGK NAPGPIGDLKISLMKDALPLAIHKLRRFGEDVFIEGYFSGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 4e-41 | 42 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 4e-41 | 42 |
