Gene Information

Name : CHY_1130 (CHY_1130)
Accession : YP_359976.1
Strain : Carboxydothermus hydrogenoformans Z-2901
Genome accession: NC_007503
Putative virulence/resistance : Resistance
Product : oligopeptide/dipeptide ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 1003961 - 1004809 bp
Length : 849 bp
Strand : +
Note : identified by similarity to SP:P94312; match to protein family HMM PF00528

DNA sequence : 
ATGGGTAAATTTTGGGAAAAAGACTGGATAAAACGCCTTTTGCAGAATAAAGCGGCGGTGGTAGGTTTAATTATTGTCTT
ACTATTACTCTTTGCTGCAATTTTTGCTCCCGTGCTTGCTCCCTATGACCCGATAAAAGATGGAAGTTTACAAAATAGGT
TAAAACCTCCTTCTTCGGAGCATTTGCTTGGTACCGATAAGCTGGGTAGGGATATTTTAAGCCGCATAATTTTTGGAGCA
CGAATTTCGGTAGAAATTGGCGTGATTTCTGTAGGTTTGGCGTTAATCGTTGGTACGTTAATGGGTTTAATTGCCGGTTA
TTATGGTGGCTTACTTGACTCTTTTCTTATGCGGATTGTTGATATTATTTTAGCTTTTCCCAGCATTCTTTTGGCTATTG
CCATTACTTCGGTTTTGGGGCCCAGTTTAAATAACGCGATGATTGCTGTGGGAATTGTAATGGTACCAAGTTTTGCCCGG
GTAGTACGGTCTACGGTGTTAAGTTTAAAAGAAATGGAGTTTGTGGAAGCAGCCCGGGCGATTGGGGCCACTGATTTTAC
CATATTGTTTCGCCATATTTTACCAAACTCCATGGCGCCGATAATTGTTCAGGGTACCATGAATATTGGTACTGCAATAT
TGGATGCCGCGGGGCTTAGCTTTTTGGGGCTTGGTGCCCAGCCGCCAACCCCTGAGTGGGGTGCGATGCTGGTTGATGCC
CGGGAACTTTTAGTAAAAGCCCCTTGGGTTGCCTTCTTCCCGGGATTAGCGATTATGTTAAACGTTCTGGGCTTTAATCT
TTTAGGAGATGGTTTAAGAGATGCTCTGGATCCCCGATTAAAACAATAG

Protein sequence : 
MGKFWEKDWIKRLLQNKAAVVGLIIVLLLLFAAIFAPVLAPYDPIKDGSLQNRLKPPSSEHLLGTDKLGRDILSRIIFGA
RISVEIGVISVGLALIVGTLMGLIAGYYGGLLDSFLMRIVDIILAFPSILLAIAITSVLGPSLNNAMIAVGIVMVPSFAR
VVRSTVLSLKEMEFVEAARAIGATDFTILFRHILPNSMAPIIVQGTMNIGTAILDAAGLSFLGLGAQPPTPEWGAMLVDA
RELLVKAPWVAFFPGLAIMLNVLGFNLLGDGLRDALDPRLKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 2e-37 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CHY_1130 YP_359976.1 oligopeptide/dipeptide ABC transporter permease BAC0272 Protein 2e-38 42