Gene Information

Name : Pcar_0803 (Pcar_0803)
Accession : YP_006716508.1
Strain : Pelobacter carbinolicus DSM 2380
Genome accession: NC_007498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 949059 - 949559 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence :
ATGACCGAAGTCATCACATCCCTGTCCGAACCTTTGTCCCTGATCCGGCGCAAGCTGCCTTTGCGCCTGAAAGTCATCCG
TCCCGTGTTCGAGACGCTCAAAGTTAAGGAGCTTCCCGCTGGCTACCTGGACGAAGCCTTCACCTCTCCCCGGAAGGTGG
CCGAAATGCTCGCCTTCCTGAAAGCGGAGAGCAAGGAGTATTTCATGGCCCTGCACCTGGACAACAAGAACCGTCTGCTG
TGTCTGGACCGGGTGTCCGTCGGCAGTCTCAGCGCCAGCATCGTCCATCCCCGCGAGGTCTTCAAGAGTGCTCTGCTGTC
CTCGGCGGCCGGTCTGGTGCTGGTCCACAATCACCCCTCCGGTCAGACCGAACCCAGCCACGAGGACGAGGAGGTCACGA
CCCGGTTAGTCAAGGCCGGGGAGATGCTGGGCATCCATGTTCTCGACCACATCATCCTGGGCGACGGGTTCTTCTCGTTT
GCCGAACAGGGCCTGCTTTGA

Protein sequence :
MTEVITSLSEPLSLIRRKLPLRLKVIRPVFETLKVKELPAGYLDEAFTSPRKVAEMLAFLKAESKEYFMALHLDNKNRLL
CLDRVSVGSLSASIVHPREVFKSALLSSAAGLVLVHNHPSGQTEPSHEDEEVTTRLVKAGEMLGIHVLDHIILGDGFFSF
AEQGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 2e-14 47
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 2e-14 47
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 1e-14 47
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 3e-14 47
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 6e-14 47
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 5e-14 47
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 47
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 2e-14 47
unnamed AAL67345.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-14 47
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 2e-14 47
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 2e-14 47
unnamed AAL08475.1 unknown Not tested SRL Protein 3e-14 47
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 3e-14 47
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 3e-14 47
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 9e-14 46
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 8e-14 46
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 1e-13 46
yeeS NP_838484.1 RADC family DNA repair protein Not tested SHI-1 Protein 1e-13 46
yeeS NP_708770.1 RADC family DNA repair protein Not tested SHI-1 Protein 1e-13 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pcar_0803 YP_006716508.1 hypothetical protein VFG1528 Protein 1e-14 47
Pcar_0803 YP_006716508.1 hypothetical protein VFG1678 Protein 1e-14 47
Pcar_0803 YP_006716508.1 hypothetical protein VFG1617 Protein 1e-14 47
Pcar_0803 YP_006716508.1 hypothetical protein VFG1066 Protein 1e-14 47
Pcar_0803 YP_006716508.1 hypothetical protein VFG0660 Protein 4e-14 46