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Name : mshE (Pcar_0388) Accession : YP_006716063.1 Strain : Pelobacter carbinolicus DSM 2380 Genome accession: NC_007498 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis ATPase MshE Function : - COG functional category : - COG ID : - EC number : - Position : 477834 - 479618 bp Length : 1785 bp Strand : + Note : - DNA sequence : ATGACGGCACGCAAAAAAATTCGCATCGGTGAATTGCTGGTGCAGCATCATATCATCAGCGAGGAGCAGTTGAATACCGC CCTGGCTGAGCAGAAACGCACCGGCAGTAAACTGGGGCACACCCTGGTCGAATTGGGCTATCTCAGCCCGACCGGCTTTC TCAAGTTTCTCGGCCAGCAGTTGCAGATCCCCTTTATCGATCTGCGGCATTATCAATACAAGGCCGAGACGGTGCGCCTG TTGCCGGAAATTTACGTGCGACGCTTTCGCGCCCTGGTATTGGCTGAAGAAGGCGACGGTCTGCTGGTCGGCATGGCCGA TCCCACAGATATCTTCGCGTTTGACGAGTTGCGCCGGATTCTCAAGCGCCCCGTCAAGCTGGCCGTGGTCGGTGAAGACG AACTCCTCGATATCGTCGATCGCATTTATCGGCGCACCGATGAAATCATTCATATCGCCGGTGAGCTCAGCGAAGAGCTG GGCGAAGGCGGTATCGACCTGGAGAGTCTGCTTTCGAGCAGCAATATCGAAGATGCCCCGGTTGTGCGTCTGCTGCACAC CCTGTTTGAGGATGCGGTGCAGATCGGCGCCTCGGACATTCATATCGAACCGGACGAGTCGGTGTTGCGCATCCGGCAGC GCGTCGACGGTATCCTGCACGAACAGGTGATGAAGGAAAAGCGCATCGGCGGGGCTCTGGTGTCGCGCCTGAAGCTGATG AGCGGCCTGGATATTTCCGAGCGTCGTCTGCCCCAGGATGGGCGATTCAACATCCGCGTGCGGGGCCGCAGCATCGACAT TCGTCTGTCCACCATGCCGCTGCAATTCGGCGAATCGGTGGTCATGCGTCTGCTCGACCAGTCCGGTGGTTTGCTTGCCT TGGAACAGATCGGAATGCCTGAAGGCCTGTTGCGGCGTTTCCATAATCTTATCAAGCGGCCCCACGGGCTGGTGCTGGTA ACCGGACCGACGGGTAGCGGCAAGACCACCACCCTTTACGGGGCCCTCAACGCCCTCAACGATACCAGCAAAAAGATCAT TACCGTCGAGGATCCGGTGGAATATCGCCTGCCGCGCATCAACCAGGTGCAGGTGCAAAGCCGTATCGATCTGTCCTTCG CGCGGGTCCTGCGGGCCGCCCTGCGCCAGGACCCCGACGTGGTCATGGTCGGCGAGATGCGCGACCAGGAAACCGCCCAG ATCGGTCTGCGCGCCGCCATGACCGGCCACCTGGTACTGTCCACCCTGCATACCAACGATGCCGTGAGCACCGCACTGCG GCTGCTCGATATGGGCGCCGAAGGTTTTGTGGTCGGCAGCTCGCTGCTGGCCATCCTGGCACAGCGCCTGGTACGCCGTG TCTGTGAAAGCTGTATGGAGGACGATCCCCTCGACGCGGGCCAGCGCAGCTGGCTGGCGGCCATGGTCGGGCCGGAAGCC CACCGACAGGTTTTCAAGCGTGGCGCCGGGTGTCCGCGCTGCCATAACACCGGTTACCACGGGCGTATCGGTATTTTCGA GTTGCTGCAGATCGACACGTCGTTGGCCGACGCCCTGCGTCGCAGCGACAGCGCCGGATTCGCCGAGCTGGCCCGTCGTC AGCCCGGCTTCCAAACCCTTTCCATGGCGGCTTACGATTATGCCTGCCAGGGCGTCACCAGCATGGAAGAGGTGCTGCGC GTTTCCGGCCAGCTCGAAGATTTTAATTCTGACTCCGGTCGGTATGCCGGTCAGGATCTAACAGAGGATGATGCGGATGC CACAGTTCCGGTACCAGGCACGTAA Protein sequence : MTARKKIRIGELLVQHHIISEEQLNTALAEQKRTGSKLGHTLVELGYLSPTGFLKFLGQQLQIPFIDLRHYQYKAETVRL LPEIYVRRFRALVLAEEGDGLLVGMADPTDIFAFDELRRILKRPVKLAVVGEDELLDIVDRIYRRTDEIIHIAGELSEEL GEGGIDLESLLSSSNIEDAPVVRLLHTLFEDAVQIGASDIHIEPDESVLRIRQRVDGILHEQVMKEKRIGGALVSRLKLM SGLDISERRLPQDGRFNIRVRGRSIDIRLSTMPLQFGESVVMRLLDQSGGLLALEQIGMPEGLLRRFHNLIKRPHGLVLV TGPTGSGKTTTLYGALNALNDTSKKIITVEDPVEYRLPRINQVQVQSRIDLSFARVLRAALRQDPDVVMVGEMRDQETAQ IGLRAAMTGHLVLSTLHTNDAVSTALRLLDMGAEGFVVGSSLLAILAQRLVRRVCESCMEDDPLDAGQRSWLAAMVGPEA HRQVFKRGAGCPRCHNTGYHGRIGIFELLQIDTSLADALRRSDSAGFAELARRQPGFQTLSMAAYDYACQGVTSMEEVLR VSGQLEDFNSDSGRYAGQDLTEDDADATVPVPGT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-85 | 42 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mshE | YP_006716063.1 | type IV pilus biogenesis ATPase MshE | VFG2048 | Protein | 6e-85 | 42 |
| mshE | YP_006716063.1 | type IV pilus biogenesis ATPase MshE | VFG1876 | Protein | 4e-88 | 42 |
